Gene Mlab_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0276 
Symbol 
ID4795430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp256038 
End bp256676 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID640098923 
Producthypothetical protein 
Protein accessionYP_001029719 
Protein GI124485103 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.714214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCAA ACAATTTTGG GTTGTATCTG ATCATCACCA AACCCTCTTT TTCCTACAGG 
AAAATCGCCG AAACCGCGGT TAAGTATAAT GTGCAGTATC TTCAACTGCG GGAGAAATCG
TTATCCGACC GGGAGATCCT GAAAGCAGCT GACGAAATCA TGCAGGTGAC AAACGGAACT
GGAACTAAAT TTATACTGAA TGACAGGGCG GATCTGGCAT TTATCTGCGG GGCAGACGGT
CTGCATCTTG GTCAGGATGA CATATCTCTC TGCGATGCAA AAAAAATCTG CGGCGAAAAA
GTATTCAGAT TCGGGCTCTC GACCCATAAT CTTGAACAGG TAAAAGAAGC GGTACAACTA
AAACCGGATT ACATTGGATT TGGGCCAATA TTTACGACCC CGACAAAAGC AAAACCGGAT
CCGGTAGTTG GAACTGAAAT GATTCCAGAA GCAGTTAAAT TAGCTGGAGA TATCCCGGTT
GTTGCGATCG GCGGAATCGA TGGAGAAAAC CTCATAAGTG TTCTTGACGC AGGCGCAAGA
AATGTGTGTA TGGTCAGGTA TTTTATGAAC AGTATGCATT TTGAGACAAG AGTAAAAGAG
ACGGTAAAGA TCCTGAACGA TTACGGGATA TGTGGATAA
 
Protein sequence
MTANNFGLYL IITKPSFSYR KIAETAVKYN VQYLQLREKS LSDREILKAA DEIMQVTNGT 
GTKFILNDRA DLAFICGADG LHLGQDDISL CDAKKICGEK VFRFGLSTHN LEQVKEAVQL
KPDYIGFGPI FTTPTKAKPD PVVGTEMIPE AVKLAGDIPV VAIGGIDGEN LISVLDAGAR
NVCMVRYFMN SMHFETRVKE TVKILNDYGI CG