Gene Mlab_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0202 
Symbol 
ID4795722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp190688 
End bp192091 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content52% 
IMG OID640098848 
Productamidophosphoribosyltransferase 
Protein accessionYP_001029645 
Protein GI124485029 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID[TIGR01134] amidophosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.19118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGCA TCACTGGCAT TACCGATTCT ACAGATGTAT CGGGATCATT GTACTTGGCA 
TTATATGCAC TCCAGCACCG GGGTCAGGAG AGTGCAGGCA TTTGTACGTA TGATGGTGAG
ACTGTACATA GATACAAAGG ATACGGGCTC GTGTCCGAGG TATTTAGCGG TCCAATCCTT
GACGGGCTGA GAGGGAAAAC AGGCATTGGT CATGTGAGAT ATCCAACGAC CGGGGGATCG
AAACCGGAGA ACATCCAGCC GTTCCATTTT ATGTTTCGGG ACCATTCTCT GTCGCTTGTC
CACAACGGGA ACCTGATCAA TACCGACGAA CTCAGATATG AATACGAAGG ACACGGCCAC
ATTTTTTCAA CGACTTCAGA CACCGAAGTC ATTGCAGCGA TCATCGCAAA CGAGATCATC
CACGACCACA CGCCTGACGA AGCGATCAGT TACTGTATGC GAAAGATCAG CGGATCATAT
GTCGTGATCT TTATGCTCGA CGGAATTCTG TATTCTTTCC GTGATCCGCT CGGCATCAAA
CCACTGTGCC TCGGAAAAAC CGAGACGGGA GGGCATGTTC TCGCTTCCGA AAGCGTAGCA
TTGGATGCGA TCGGGGCCGA ATTTATCAGA GACATCCGCC CCGGCGAGAG CGTTAGACTG
CAGGGTGGGG AAGTTTTTTC CAGGCAAGTG ATGAAAGCAA AATCCTGCGC TCACTGCATG
TTCGAGTATG TCTACTTCGC ACGGGCCGAT GCCGTCATTG ACGGGGTCTC GGTCTACGAT
GTGCGCAGAA AAACCGGAGC ACTCCTCGCA AGGGAAGCGC CGGCAAAAGC GGATCTTATC
TCGCCCGTTC CGGATTCGGG AACGGCGGCG GCGACTGGAT TTTCCCGTGA ATCGGGCACC
CCTTTCCGTG AAGCCCTGAT CAAAAATCGG TACACGGGCC GGACATTCAT TATGCCGAGC
CAGGAAAAAC GCGAGATCGC TGTTCGGATG AAACTAAATC CGGTTCGCGG TCATATCAAA
GACAAATCCG TGGTCTTAGT CGACGACAGC ATCGTTAGAG GAACGACCTC GAAAAAGATC
CTGTCTCTTG TGCGCGAGTT CGGTGCAAAG GAGCTCCATC TCAGAATCGC ATCACCACCG
ATCATCGCCC CCTGTTATCT TGGAACGGAT TTTCCAACAA GGGATGAACT GATCGCTTCG
ACGAAATCGG TCAGCCAAGT GGAAAAAGAG ATCGATGCAA CCAGTCTTGC GCACATCTCG
CTTGACGGAC TCATCAAAGC GATCGGCATT CCGCGACAGG ATCTCTGTCT TGGATGTCTG
ACCGGGAAAT ACCCGCTGGC AATTCCGGGA GAAAAAGAGG ACGACCGCGA GATAGAGATG
GTAGACTCCT ACTCCTGCCC CTGA
 
Protein sequence
MCGITGITDS TDVSGSLYLA LYALQHRGQE SAGICTYDGE TVHRYKGYGL VSEVFSGPIL 
DGLRGKTGIG HVRYPTTGGS KPENIQPFHF MFRDHSLSLV HNGNLINTDE LRYEYEGHGH
IFSTTSDTEV IAAIIANEII HDHTPDEAIS YCMRKISGSY VVIFMLDGIL YSFRDPLGIK
PLCLGKTETG GHVLASESVA LDAIGAEFIR DIRPGESVRL QGGEVFSRQV MKAKSCAHCM
FEYVYFARAD AVIDGVSVYD VRRKTGALLA REAPAKADLI SPVPDSGTAA ATGFSRESGT
PFREALIKNR YTGRTFIMPS QEKREIAVRM KLNPVRGHIK DKSVVLVDDS IVRGTTSKKI
LSLVREFGAK ELHLRIASPP IIAPCYLGTD FPTRDELIAS TKSVSQVEKE IDATSLAHIS
LDGLIKAIGI PRQDLCLGCL TGKYPLAIPG EKEDDREIEM VDSYSCP