Gene Mlab_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0187 
Symbol 
ID4795790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp176043 
End bp177818 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content54% 
IMG OID640098833 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001029630 
Protein GI124485014 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAT ATGCAGGAAA TATGGTCTAT GTCGATCTCA CCTCCGGAAC AACGGCAGTC 
AAACCAACGC CCCCGGAACT GAAAAAGTCG TATATTGGCG GACGGGGTTT TGGTATCAGA
CTCCTTACCG ATATGGTCGA CCCGAAGATC GATCCGTTGA GTGATAAGAA CATTCTCGTC
TTTGCGGCCG GACCGTTGAC CGGGACCGGG ATTCCCCTTG GAAGCCGGTA TGAGGTCTCG
ACGATCGCTC CCTTGACCGG ACTTGCCGTG AGCGCCAACA GCGGGGGCGT TTTCGGCTGG
AAGCTGAAAA AGGCCGGGTT CGATGCGGCC GTCATCACCG GAAAATCAGC AAAACCGGTC
TATCTCTTGC TCGACAACGG GAAAGCCGAA CTCCGCGATG CTTCCCGCCT CTGGGGTAAA
ACCACCGGCG AGACCACCGA TGCCATCGTC GAGGAGCTGA AAGATCCGAG TGTTCGTGTG
TCATGTATCG GACCTTCCGG TGAGAAACTC GTTTTGATGT CGTGTATCAT CAATGAAAAG
ACCCGCGCCG CCGGACGTGG CGGGGTTGGG GCCGTGATGG GCTCGAAGAA TCTGAAAGCG
ATCGCAGCCC GGGGTGATCA GCTGATTAAG CCGGCAGATG AAGAACAGCT CAAAACCGTT
AAGGAACGCG TGAAAAACAA GATCCAGGAG AACGGGATCG CCAAAGGTCT GCATGATTAC
GGAACGGCTG TCCTCGTCAA CATTCTGAAC GAAAATTATC TTCTGCCGAC AAGAAACTTC
CAGACCGCCC ACTTCGACGG GGCGGAGAAG ATATCCGGCG AAACGATGGC GCAGACGATT
CTTAAAAAAC CCAAAGGCTG TTACTCCTGT ATTGTCCAGT GTGGCCGGGT CCATGAATTC
GACGGAGTTA CCGGCGAAGG TCCGGAGTAT GAACCAGATT GGGGATTTGG TGCCGACTGC
GGTGTCGATG ATCTGAAAAT CATTGCCAGG GCAAACGATC TCTGTAATGA GTATGGCCTT
GACTCCATCT CTGTTCCTAC CACGATCGCC TGTTTAATGG AGATGGCGGA GAAAGGGTAT
ATCGACCACC CGATCCGGTT CGGCGATGCA GAAGGTATGC TGAAACTCGT TGAGCAGATT
GCAAAACGCG AAGGCATAGG CGACGAACTT GCCGAAGGCT CCTTCCAGTT TGCGACCAAA
CACGGACATC CGGAACTCTC GATGAGTTCC AAAAAGCAGG AACTGCCTGC CTACGACCCC
CGGGGAATTC AAGGGTATGG TCTTGCGACC GCCACCTCGG TTCGCGGGGG TGATCATGTC
TATGCGTACA TGATCTCGCC GGAGATTCTC GGCGCTCCCG AGAAGATCGA TCCCTATCTG
ATCAAAGGCA AACCCCAGTG GGTCAAAACC TTCCAGGATC TGACCGCTGC GATCGATGCA
ACCGGCATGT GCCTCTTTAC GTCTTTTGCT CTTGACGCAG AGGATTATGC CGACCTTCTC
TCGGCAACAA CCGGCGTGAA GATCGGTGCC GATGAGCTTC TGCAGGTCGG TGAACGGATT
TGGAATCTCC AGAAGCTCTA TAATGTCAAG CGGGGATTCG GCCGTAAAGA CGACACTCTG
CCGGACCGTC TCCTGCACGA GCCTTTAAAA GAAGGTGCGC CGGCTGGTCA GGTGTCCCAT
GTGCTCGAAA TGCTTGACGA GTATTATGCT CTGAGGGGCT GGGATGCGGA AGGAGTTCCA
ACCGAAGCAA AACTCAAAGA ACTGGGACTG ATGTGA
 
Protein sequence
MDGYAGNMVY VDLTSGTTAV KPTPPELKKS YIGGRGFGIR LLTDMVDPKI DPLSDKNILV 
FAAGPLTGTG IPLGSRYEVS TIAPLTGLAV SANSGGVFGW KLKKAGFDAA VITGKSAKPV
YLLLDNGKAE LRDASRLWGK TTGETTDAIV EELKDPSVRV SCIGPSGEKL VLMSCIINEK
TRAAGRGGVG AVMGSKNLKA IAARGDQLIK PADEEQLKTV KERVKNKIQE NGIAKGLHDY
GTAVLVNILN ENYLLPTRNF QTAHFDGAEK ISGETMAQTI LKKPKGCYSC IVQCGRVHEF
DGVTGEGPEY EPDWGFGADC GVDDLKIIAR ANDLCNEYGL DSISVPTTIA CLMEMAEKGY
IDHPIRFGDA EGMLKLVEQI AKREGIGDEL AEGSFQFATK HGHPELSMSS KKQELPAYDP
RGIQGYGLAT ATSVRGGDHV YAYMISPEIL GAPEKIDPYL IKGKPQWVKT FQDLTAAIDA
TGMCLFTSFA LDAEDYADLL SATTGVKIGA DELLQVGERI WNLQKLYNVK RGFGRKDDTL
PDRLLHEPLK EGAPAGQVSH VLEMLDEYYA LRGWDAEGVP TEAKLKELGL M