Gene Mlab_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0071 
Symbol 
ID4795871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp75571 
End bp76056 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content50% 
IMG OID640098716 
ProductXRE family transcriptional regulator 
Protein accessionYP_001029516 
Protein GI124484900 
COG category[K] Transcription 
COG ID[COG4800] Predicted transcriptional regulator with an HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000421347 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGAAC AGAGAATATT CGAGACCGAT TTTCGCGTGG CATTGTCCGA AGAGCTCGAC 
CGCCGAGGTT TAAGCATTCG CCAGCTCTCC GAACAGACTG GTATCCCTGC GGTGACTCTG
TATAAGATCG CATCCGGTGA ACGCGATCCC CGTCTCTCTA CCGTGAAAAA AATCGTTGCC
GTTTTTTCAC CTCATCATGG AAAATTCATA GCCCTGATCG CAGCAAAATT TCTCCTTGAT
GAGAACGAAG GGGTCAAGAT CGAGGCAAAC GGAACGGCGT ACAGGATCAA AGGATACGCG
GCAAACTCTC TCGAAGACTG CCTTATCGTT GCCGTTCGCG CAAGAAACGA CGGTGCGGCC
GGCATTATCT GTGCGCCGAT TCTCGCCTCG CTCATTGAAA AAATGGTGGA TGTTCCGGTG
GCAATTTTAA AACCTGATAT GTATGCCGTG CTTGGCGCAG CGGAATCAAT TGCAAAACGA
CTCTAA
 
Protein sequence
MFEQRIFETD FRVALSEELD RRGLSIRQLS EQTGIPAVTL YKIASGERDP RLSTVKKIVA 
VFSPHHGKFI ALIAAKFLLD ENEGVKIEAN GTAYRIKGYA ANSLEDCLIV AVRARNDGAA
GIICAPILAS LIEKMVDVPV AILKPDMYAV LGAAESIAKR L