Gene Mlab_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0055 
Symbol 
ID4794758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp56210 
End bp56902 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID640098700 
Producthypothetical protein 
Protein accessionYP_001029500 
Protein GI124484884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0133021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCT TAGATAAAAT CTCCCCGTTT GAAAGAAAAG ATCTTCTGAT CGCCTGGCTT 
GTCCTCGGTG TTGCCTTTAC GTTAGGCATC AACGGCGGAT TTGCATTACT TACCGACTAT
CAAAATATAA CCGTAGAAGG ACTTCTGATA ACCTTCCTCG TATCGCTGAT CGCGGTCGGA
CTTTCCTTCG TGCTTCACGA ACTTGCCCAC AAATTCACCG CCATGAGGTT CGGTTACTGG
GCAGAATTCA GAAAAAGCAC GCAGATGCTG ATCATCGCCG TTGTCGTTGC GGCCATCACG
GGAATCGTAT TTGCCGCACC CGGAGCAACA CTCATCAACA CGGCCGGTCG CGAGATGACC
AAAAAAGAGA ACGGACTCAT CTCCATCGCC GGACCTCTGA CGAATCTGGT CCTGATCATC
CCGTTTATCA TCATCATGAT CATCGGATTC ATGATGTCGC CTTCGACAGG AATCGTCCTC
TTCACTCTCC CGGGATTTTT GTTCTATCTG GGATTGATCG GCTTCCAGGT CAATGCGATG
CTAGCATTCT TCAACATGCT GCCGGTCGGG CCGCTTGACG GAAAAAAGAT TATGAAATGG
AACCCAGTCG TCTTCGGCGT TGTTATCGCC GTATCGCTTG TTCTGCTCTA TCTCGCACTC
GTGCCGACCG TGATTCTCTC GCTTTTTGTC TAA
 
Protein sequence
MSLLDKISPF ERKDLLIAWL VLGVAFTLGI NGGFALLTDY QNITVEGLLI TFLVSLIAVG 
LSFVLHELAH KFTAMRFGYW AEFRKSTQML IIAVVVAAIT GIVFAAPGAT LINTAGREMT
KKENGLISIA GPLTNLVLII PFIIIMIIGF MMSPSTGIVL FTLPGFLFYL GLIGFQVNAM
LAFFNMLPVG PLDGKKIMKW NPVVFGVVIA VSLVLLYLAL VPTVILSLFV