| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0044 |
|---|
| Symbol | |
|---|
| ID | 4795785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 47144 |
|---|
| End bp | 48067 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640098689 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029489 |
|---|
| Protein GI | 124484873 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.616178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.403323 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TGCTCGAGAT CAGTGACCTG TCCGTCTCCT TCCCGGGACC GAACGGAAAA
ATTCCCGCTG TCCGAAATCT CTCTCTCTCG CTTGCACCGG GAGAGTGTCT TGCGATCGTC
GGCGAGTCCG GGTGCGGGAA GTCCGTGGTT GCCCAGGCGG TCTTACGTCT CCTCCCCCCC
GGGACCGAGG TTCTTGGCCG CATCTCGTAT CAGGGGCAGG ATCTTCTGCA TCTCTCTGAA
AATGAGATGG ATCATATTCG GGGTCAGGAG ATCGGGATGG TTTTTCAGAG CCCGGAAAGA
GCTCTCAATC CGGTGATGAA GATTGGAAAA CAGCTGATCT CACCGCAGGT GATGCATGGA
CTCTGTTCGG AAAAGGATGC GGAGCTTCGG GCGAAAGGTG TCCTGCAGAG TCTTGGTCTG
GACGCAGACC GGGTTATGTC CTCCTATCCC TGGATGTGTT CCGGAGGGAT GTGTCAGCGG
ATCGTGTTTG CCGCGGTCTC CCTTCTTCAT CCGAATCTGG TGATCGCCGA TGAGCCGACC
AAAGGACTTG ACGCCGCAAA TGTCACGGAT CTTGAAGCGA TGCTTTCCAC GGTCACTGCC
GGAAAAAGCA CTGGTCTTCT TTTGATCACG CATGATATGG ATGTAGCCTC CCGTCTTTCG
AACCGCATTG CCGTTATGTA CTGCGGCATG ATCGTCGAAG AGGGGGAGAC TAAGTCCGTT
TTATCATCAC CGAAGCATCC GTATACCCGT GGTCTTCTCG GCAGTCTTCC AAAGAACGGG
TTCGTGCCGA TCCCGGGAAT CTCTCCAGCA CTCAGCGATC TGCCGAATGG CTGCGTCTTT
CATCCGCGTT GTGTGTTTGC TGACGAAACG TGCAGAACGG AAATCCCTGA TCTGATTGAC
GGAGTGAGGT GCCGCCGATG CTGA
|
|---|
| Protein sequence | MKNMLEISDL SVSFPGPNGK IPAVRNLSLS LAPGECLAIV GESGCGKSVV AQAVLRLLPP
GTEVLGRISY QGQDLLHLSE NEMDHIRGQE IGMVFQSPER ALNPVMKIGK QLISPQVMHG
LCSEKDAELR AKGVLQSLGL DADRVMSSYP WMCSGGMCQR IVFAAVSLLH PNLVIADEPT
KGLDAANVTD LEAMLSTVTA GKSTGLLLIT HDMDVASRLS NRIAVMYCGM IVEEGETKSV
LSSPKHPYTR GLLGSLPKNG FVPIPGISPA LSDLPNGCVF HPRCVFADET CRTEIPDLID
GVRCRRC
|
|---|
| |