Gene Mlab_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0042 
Symbol 
ID4795652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp45385 
End bp46341 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content52% 
IMG OID640098687 
Productdihydrodipicolinate synthase 
Protein accessionYP_001029487 
Protein GI124484871 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.8312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.78921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA TCCTTGCCAG AAAAATCGTC CGCTATGCCG TATGCCTGCT GATAGTTGTT 
CTGCTCGTGT TTCTTCTTCC CCGCTGCATG CCCGGCGACC CGGTCCAGTG CCTAGTCGGA
GAGGACGTGT ATCTGACTCA GGAGATTCTC GATACGGTCA CGGTCAAACT TGGCCTTGAC
CGCCCGCTTT TCGAGCAGTT CCAGATCTAT ATCGGGGACC TTTTCACGGG GAATCTGGGA
TATTCCTATA CAAGGCATCA GAATGTGGCC GATCTGATCT GGGACCGCCT TCCCTGGACG
CTTCTTCTCA CGGGAGTTTC CATGCTGATC GGCTATACGT TTGGGATCAT CGCCGGTACC
TGGGCTGGGT GGATGACTGA GAAAAAACGT GCGAAGGTCA TGACCGGATT TGGAGTCTTC
GTGTCCTGCA TTCCGCCGTA TTTACTCGGT CTGATCTTTT TCTCGGTGTT CGTGTACCAG
CTCGGCTGGT TCCCCTACAA AGGATTTTAC GAGACCCCGG ATCTTTTCAG CGTGTGCTAT
CATATGGCGC TTCCCGTTTT GACGCTCGCC TTGTTCGTAT TTGCGAGAAA CATGATCATC
ATGCGGGGGT CCGTTCTGAC GGAAAAAAAC CAGCTGTATC CGCAGTTTGC AAAAAGTCTC
GGCGTTCCCC GAAGAAAAAT CATCTACGGT CATGTGATGA AGAATGCGAT CCTGCCGATC
CTTACCCATT TTGCGATCGA CTTCGGCTTC ATTTTATCCG GCGCGCTTTT TATCGAGATC
ATTTTCTCAC TCAATGGTCT TGGAAGAGTC ATGTACACGG CGGTCCTGAA TCTGGATTAT
CCGGTGCTTT CCGGACTGTT TCTGGTGATC GCTCTCATGG CGATCTGTGC GAATCTGATC
GCCGACATTC TCTACGGGAT CATCGATCCG CGGGTGAAAC GGGGTGACGA TCAGTGA
 
Protein sequence
MNKILARKIV RYAVCLLIVV LLVFLLPRCM PGDPVQCLVG EDVYLTQEIL DTVTVKLGLD 
RPLFEQFQIY IGDLFTGNLG YSYTRHQNVA DLIWDRLPWT LLLTGVSMLI GYTFGIIAGT
WAGWMTEKKR AKVMTGFGVF VSCIPPYLLG LIFFSVFVYQ LGWFPYKGFY ETPDLFSVCY
HMALPVLTLA LFVFARNMII MRGSVLTEKN QLYPQFAKSL GVPRRKIIYG HVMKNAILPI
LTHFAIDFGF ILSGALFIEI IFSLNGLGRV MYTAVLNLDY PVLSGLFLVI ALMAICANLI
ADILYGIIDP RVKRGDDQ