Gene Mlab_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0017 
Symbol 
ID4794692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp17224 
End bp19068 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content52% 
IMG OID640098662 
ProductaIF-2BII family translation initiation factor 
Protein accessionYP_001029462 
Protein GI124484846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG ACACGAAGCA AAAAATCATT TACGCCGCAT CCATGGCGGC AACATTTCAA 
CCCGACTCAT TATCCAACGA TAAACTGGAG GCTGCCACAA AAGGCCACGG TGCTCTGGTA
ATTCCCGTCT ATGCAGCTGC AAACTCTATC GCAGAAGACA TTTTCGGTTC GCTTTCGGGA
AAGCAACCAA ATTCAGCGGA GAAAATGACG GTGCTGGACG CAGCACTTGG TGAACTCCCG
CTGGACACCG TCATAGAAAA AGCTGTGAGA GCGGCGGCAA ATGCCGGATC TGCTCCGGAA
AATACCGCGT TGATCGTTGC CGCGCTCGCT TACTTTGCAG GGTCGGCCGC ACGGTCCGGT
GTCCCTCTCG GAAACAGAAA ACTTGGTGCT ATGGCAAGAA TGCATGCGGG AGGCGCCAGA
ACAAGCGCTA TTGCCTTAGT AACCGGAAAA TCCACACACA GGATCCAGGC ATTTCCCGCC
TACATGGCAA TCTACAAAGC TCTTGAAGAG AAAAAGCTCA CCAGTGTCGA CGGCTCGCTC
CTTCCGGGAT TCATCTCCGG CGGAACGATC TATGGTCACT CTGCACTTGG AGAAGACTAC
AACATTCCAG AGCTTGCCTA CAACGCCGCA CAGGTTGGAA CAAAGGCAAT GCTGAATGCG
ATGGCCGGAG CCGGCGTCAC GCCGCTTGCC CTTTGGCCGG CATTGATCGG TTCGGCGGTG
ACGATGGAAA TCGTACATCC TGACGCAATT CTCGGAGAGG AATTTGGCAA ATTCGGTGCT
GTTAACTCCT CGTATATGGC AGGAAAAGGT GCCCGCGATG CGGCAAAGCT CCCGGAAAAA
CTGCATATTC GCGGCACGCA CGAGGAATAT GACACGGCAA CACTCTTAGG AGATTTTGGT
CTCATTCTCA AAGATGTGGG TGGACCCTCT GTTATCGGGT CCATGGCATT TTCGGAGATC
TTTGCCGGAT TTGAAGAAGC GGCAATGATC GGCGCAGGAT TTTCCGGAGG GCCGGTCAAT
GCTCCTCTGG GTCATGTGAT TGGAGATATT GTTCCCGCTC TTCGCTTGTT AATGCAGAAC
GGAGGCGATG TGTTTGCGGC GGCGGACGTC ATCAGGGAAT ACAAGATGAA CTCATTCATC
GACCCGGAGT TGGCCATTTG CAGTTTGAAC ACCATCGCAC GGAAAGCCGA GCAGGTGTCA
CGAGGAAAAA TCACGAATGT GTGTATCTTA GCATCCGAAG GGGTCCGTGA CAGAGCAATC
TACCGTCGTG CAGACAAGAC CTACGAGATG ATGAGCAGTG GAAAATCTTT AGCCGATGCT
GCAAAACTCT TGGATGAAGA ACGCAAAGCA TACGTCGAGA AGAGAGGATC GACAATCCTT
TCAGGATTCA CCGGTCATGC TATTGAACTG AAATTCACGG AACTCAAACC CCATGGAAGA
CGGACGGATA AGTTCACCGA ACGTTACTGG GGTTTTGATT CATATGTTTC CTATGATATA
AAAATCGACG GAAAGCCATA TCATGTAGAG AATTTAAGCG GAAAAGAGGT TCCCGCTTTT
GCGCTGGACG GTAAAAACAG AGATAATCCG GATTGGGGCA TGGCCCTGCA GTGCGGCGCA
ATCCTCGCGC AGGAACTGCA GTACATCGGG CACACGATCA TCAATGTCAC GGTCCCGGCG
GCCGTCGGCA GTCTCTTCGG TCTGGAGGCA AAAGCAGCGG CAAAAGAGGC TGAAGACGGG
GCATATCTCA CGCGGTCGAT TCCAGGTGCA AAAGAAAAGG CAACTGAAGT TGCAAAACTC
TCCCAGCTGA TCTATGCAAA GATGGAAGAG CCGTTTCCAG AATGA
 
Protein sequence
MTNDTKQKII YAASMAATFQ PDSLSNDKLE AATKGHGALV IPVYAAANSI AEDIFGSLSG 
KQPNSAEKMT VLDAALGELP LDTVIEKAVR AAANAGSAPE NTALIVAALA YFAGSAARSG
VPLGNRKLGA MARMHAGGAR TSAIALVTGK STHRIQAFPA YMAIYKALEE KKLTSVDGSL
LPGFISGGTI YGHSALGEDY NIPELAYNAA QVGTKAMLNA MAGAGVTPLA LWPALIGSAV
TMEIVHPDAI LGEEFGKFGA VNSSYMAGKG ARDAAKLPEK LHIRGTHEEY DTATLLGDFG
LILKDVGGPS VIGSMAFSEI FAGFEEAAMI GAGFSGGPVN APLGHVIGDI VPALRLLMQN
GGDVFAAADV IREYKMNSFI DPELAICSLN TIARKAEQVS RGKITNVCIL ASEGVRDRAI
YRRADKTYEM MSSGKSLADA AKLLDEERKA YVEKRGSTIL SGFTGHAIEL KFTELKPHGR
RTDKFTERYW GFDSYVSYDI KIDGKPYHVE NLSGKEVPAF ALDGKNRDNP DWGMALQCGA
ILAQELQYIG HTIINVTVPA AVGSLFGLEA KAAAKEAEDG AYLTRSIPGA KEKATEVAKL
SQLIYAKMEE PFPE