Gene Mlab_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0014 
Symbol 
ID4796035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp13919 
End bp14401 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content49% 
IMG OID640098659 
Productcoenzyme F420-reducing hydrogenase, delta subunit 
Protein accessionYP_001029459 
Protein GI124484843 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00130] coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit). 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAC TGTTTCCAGA AATAATAATC GCCGGTGTCG GTAACGAACT CTTTGGCGAC 
GACGGATTTG GTCCCGTTGT GATCAGAGCT TTAGCTGACT ACGAACTTCC CGACAATGTA
AAAGCAATGG ATGTAGGCCT TGGCGGCCCT CACCTCATCT TTTCGATGCT GGATCCAGAA
GTCACAAAAA AACTGATCAT TGTGGATGCA ATGGACTTCG GGGGAAAACC CGGAGACGTC
ACGAAAATCC CCGCCGATCT TCTTCCTGAA GGCAGAGGAG AACGTTACAT GGATGCCCAT
TCCGGAAATC TGCTCGATCC GATCGGCAGA CTGAAAGGAA AAATGGATAT TGTTATTATC
GGGTGCCAGC CCGGGTATAT TCCTGCTCCG GATTCAGAGG ACTTTGCCCT CGAATTAAGT
CCGGAAGTCC AAGGAGCTGT TCCCAAAACT GTAACTGTCA TCTTACAGGA ATTAGAGAGC
TGA
 
Protein sequence
MDGLFPEIII AGVGNELFGD DGFGPVVIRA LADYELPDNV KAMDVGLGGP HLIFSMLDPE 
VTKKLIIVDA MDFGGKPGDV TKIPADLLPE GRGERYMDAH SGNLLDPIGR LKGKMDIVII
GCQPGYIPAP DSEDFALELS PEVQGAVPKT VTVILQELES