Gene Mlab_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0004 
Symbol 
ID4794930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp3537 
End bp4952 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content53% 
IMG OID640098649 
ProductDNA polymerase II small subunit 
Protein accessionYP_001029449 
Protein GI124484833 
COG category[L] Replication, recombination and repair 
COG ID[COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC GCGAGATTGT TACCCGGTTT GCTGATGCCG GATTTTTGGT GAATCATCAG 
GTTGTGAATT ATATCAGCGA ATGCGGCGGA ACCGGGGTCA TTGAAGGGAT CATCGCCTCC
CTTCCCAAAG GAGTGACGGT CGTTACTCCA AAGGAGGTGC CTGCGATGAT CCCTCTTCGG
ACCGACAAAC TCAATGTAGG GGTCAGCAGG ACGCCCGAGA TCCTTTTCGG GCGGGCGGGG
AGTTCGGTCC CCCTCCCGGA TCCGGAATCC TCTTACACGA TGTTTCGCGA CCGGTATGAT
TCTCTTGCCG CTATGATGCG GGGCCGAGTC AGTCCGATCC CGATCGAAGC TCTTGTCAGG
ACAGGCAACC GGTTTACGGA TCAGCAGATC GGTCTTGTGG GTATGGTGAG TTCGATCTCG
ACAAGTGCCA AAGGTCATCG GATCGTTGAG GTCGAGGATT CGACCGGCTG TATCAAAGTG
CTTTTCAATA GAAACCGTGA TGGATTCGCC GAGGCCGAGG CTATCATCCC TGATGAGGTC
ATCGGCGTGA AAGGTCAGCT CGCCCGCGAC AGTATGGGAA AGACCCAGAT GGTTTTTTCC
GACATGCTGT TTCGGCCGGA TATCCCGCTG ACGAATGTCC CTTCTCCCTC GAAAGAACAG
GGCAAGGCCG TGTTTATTTC AGATATCCAT GTGGGCAGCA ATACGTTTTT GCCTGATGCA
TGGGAGAAGT TTTCAGAATG GATGCAGACA CGCGAAGATA TCGGGTATCT CCTTATCGCC
GGGGATGTGG TGGACGGGAT TGGTATCTAT CCTGATCAGG ACAAGGAGCT GGATATCAAA
ACTATTTATG AACAGTACGA TCATGTCGGT GATCTTATGG CCGCCCTGCC GGATTGGCTG
AAAATCGTCA TCTCTCCCGG CAACCACGAT GCCGTCCGGG GAGCCGAACC CCAGCCGGCT
CTTCCCGAAG AGTTTCGCGG AAATTTCCCA TCTAACGTTA CCTTCGTTGA AAATCCTGCC
CTCGTCAACA TCCAGTCGGT CAACGTACTT ATGTACCATG GAAGAAGCAT CGATGATCTG
ATCAAGTTCA TTCCGGGAGC CTCCTATACG AAAGTCGGCG AGATCATGGA GGCCATGCTC
AAACGCAGGC ATCTTGGTCC GATCTACGGT CAGAGGACAC CTCTTCTCTC CACGGATAAA
GACGCCCTCG TCATTCGCGA CGTGCCGGAC ATCATCCATA CCGGGCACGT TCACATAAGC
GATGTCATTT CATACCGGGG GGTCCTCGGG ATAAATGCCG GGACCTGGCA GTCTCAGACC
TCCTTCCAGA AACAGATGAA TATAACCCCG ACCCCGGCCG AGGCGGTTGT CGTGGATCTT
GCGACGCTAA GCTATGAAAA ACTCTGTTTT CTTTAA
 
Protein sequence
MDKREIVTRF ADAGFLVNHQ VVNYISECGG TGVIEGIIAS LPKGVTVVTP KEVPAMIPLR 
TDKLNVGVSR TPEILFGRAG SSVPLPDPES SYTMFRDRYD SLAAMMRGRV SPIPIEALVR
TGNRFTDQQI GLVGMVSSIS TSAKGHRIVE VEDSTGCIKV LFNRNRDGFA EAEAIIPDEV
IGVKGQLARD SMGKTQMVFS DMLFRPDIPL TNVPSPSKEQ GKAVFISDIH VGSNTFLPDA
WEKFSEWMQT REDIGYLLIA GDVVDGIGIY PDQDKELDIK TIYEQYDHVG DLMAALPDWL
KIVISPGNHD AVRGAEPQPA LPEEFRGNFP SNVTFVENPA LVNIQSVNVL MYHGRSIDDL
IKFIPGASYT KVGEIMEAML KRRHLGPIYG QRTPLLSTDK DALVIRDVPD IIHTGHVHIS
DVISYRGVLG INAGTWQSQT SFQKQMNITP TPAEAVVVDL ATLSYEKLCF L