Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0004 |
Symbol | |
ID | 4794930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 3537 |
End bp | 4952 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640098649 |
Product | DNA polymerase II small subunit |
Protein accession | YP_001029449 |
Protein GI | 124484833 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGC GCGAGATTGT TACCCGGTTT GCTGATGCCG GATTTTTGGT GAATCATCAG GTTGTGAATT ATATCAGCGA ATGCGGCGGA ACCGGGGTCA TTGAAGGGAT CATCGCCTCC CTTCCCAAAG GAGTGACGGT CGTTACTCCA AAGGAGGTGC CTGCGATGAT CCCTCTTCGG ACCGACAAAC TCAATGTAGG GGTCAGCAGG ACGCCCGAGA TCCTTTTCGG GCGGGCGGGG AGTTCGGTCC CCCTCCCGGA TCCGGAATCC TCTTACACGA TGTTTCGCGA CCGGTATGAT TCTCTTGCCG CTATGATGCG GGGCCGAGTC AGTCCGATCC CGATCGAAGC TCTTGTCAGG ACAGGCAACC GGTTTACGGA TCAGCAGATC GGTCTTGTGG GTATGGTGAG TTCGATCTCG ACAAGTGCCA AAGGTCATCG GATCGTTGAG GTCGAGGATT CGACCGGCTG TATCAAAGTG CTTTTCAATA GAAACCGTGA TGGATTCGCC GAGGCCGAGG CTATCATCCC TGATGAGGTC ATCGGCGTGA AAGGTCAGCT CGCCCGCGAC AGTATGGGAA AGACCCAGAT GGTTTTTTCC GACATGCTGT TTCGGCCGGA TATCCCGCTG ACGAATGTCC CTTCTCCCTC GAAAGAACAG GGCAAGGCCG TGTTTATTTC AGATATCCAT GTGGGCAGCA ATACGTTTTT GCCTGATGCA TGGGAGAAGT TTTCAGAATG GATGCAGACA CGCGAAGATA TCGGGTATCT CCTTATCGCC GGGGATGTGG TGGACGGGAT TGGTATCTAT CCTGATCAGG ACAAGGAGCT GGATATCAAA ACTATTTATG AACAGTACGA TCATGTCGGT GATCTTATGG CCGCCCTGCC GGATTGGCTG AAAATCGTCA TCTCTCCCGG CAACCACGAT GCCGTCCGGG GAGCCGAACC CCAGCCGGCT CTTCCCGAAG AGTTTCGCGG AAATTTCCCA TCTAACGTTA CCTTCGTTGA AAATCCTGCC CTCGTCAACA TCCAGTCGGT CAACGTACTT ATGTACCATG GAAGAAGCAT CGATGATCTG ATCAAGTTCA TTCCGGGAGC CTCCTATACG AAAGTCGGCG AGATCATGGA GGCCATGCTC AAACGCAGGC ATCTTGGTCC GATCTACGGT CAGAGGACAC CTCTTCTCTC CACGGATAAA GACGCCCTCG TCATTCGCGA CGTGCCGGAC ATCATCCATA CCGGGCACGT TCACATAAGC GATGTCATTT CATACCGGGG GGTCCTCGGG ATAAATGCCG GGACCTGGCA GTCTCAGACC TCCTTCCAGA AACAGATGAA TATAACCCCG ACCCCGGCCG AGGCGGTTGT CGTGGATCTT GCGACGCTAA GCTATGAAAA ACTCTGTTTT CTTTAA
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Protein sequence | MDKREIVTRF ADAGFLVNHQ VVNYISECGG TGVIEGIIAS LPKGVTVVTP KEVPAMIPLR TDKLNVGVSR TPEILFGRAG SSVPLPDPES SYTMFRDRYD SLAAMMRGRV SPIPIEALVR TGNRFTDQQI GLVGMVSSIS TSAKGHRIVE VEDSTGCIKV LFNRNRDGFA EAEAIIPDEV IGVKGQLARD SMGKTQMVFS DMLFRPDIPL TNVPSPSKEQ GKAVFISDIH VGSNTFLPDA WEKFSEWMQT REDIGYLLIA GDVVDGIGIY PDQDKELDIK TIYEQYDHVG DLMAALPDWL KIVISPGNHD AVRGAEPQPA LPEEFRGNFP SNVTFVENPA LVNIQSVNVL MYHGRSIDDL IKFIPGASYT KVGEIMEAML KRRHLGPIYG QRTPLLSTDK DALVIRDVPD IIHTGHVHIS DVISYRGVLG INAGTWQSQT SFQKQMNITP TPAEAVVVDL ATLSYEKLCF L
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