| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A2142 |
|---|
| Symbol | fliF |
|---|
| ID | 4792726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008836 |
|---|
| Strand | + |
|---|
| Start bp | 2162148 |
|---|
| End bp | 2163944 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | flagellar MS-ring protein |
|---|
| Protein accession | YP_001028106 |
|---|
| Protein GI | 124383455 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCGC AGGCCAACTC GCTGATCAAC CCCGACGCCC GTTCGAGCCT TGCGGGCGCA
TCGCCGCAAG CCGCGGCCGC GGCGGGCGCG CTGCCGGGCG CGGCGGCGGG CGGCGCGGAT
TTCGGCCTGG GCGGCTTCGC CGAACGCATC CCGGGCCTCT CGCGAATGAA GACGAACCCG
CGGCTGCCGT TCCTGATCGG CGCGGCGCTC GCCATCGCCG CGATCGTCGC GCTCGTGCTC
TGGAGCCGCG CGCCCGACTA CCGCGTGCTG TACAGCAACC TGTCCGACCG CGACGGCGGC
GCGATCATCG CCGCGCTCCA GCAGGCAAAC GTTCCCTATA AGTTCGCCGA CGCGGGCGGC
GCGATCCTCG TGCCCGCGAA CCAGGTGCAC GAGACGCGCC TGAAGCTCGC CGCGATGGGG
CTGCCCAAGG GCGGCTCGGT CGGCTTCGAG CTGATGGACA ACCAGAAATT CGGCATCAGC
CAGTTCGCCG AGCAGGTCAA CTACCAGCGC GCGCTCGAGG GCGAGCTGCA GCGCACCGTC
GAATCGAGCA ACGCGGTGCG CGCCGCGCGC GTGTATCTGG CGATTCCGAA GCCTTCGGTA
TTCGTGCGCG ATCGCGAGGC GCCGTCGGCG TCGGTGCTCG TCGATCTGTA CCCGGGCCGC
GTGCTCGACG AAGGGCAGGT GCTCGCCGTC ACGCGCATGG TGTCGTCGAG CGTGCCCGAC
ATGCCCGCGA AGAACGTGAC GATCGTCGAC CAGGACGGCA ACCTGCTCAC GCAGACCGCG
TCCGCCACCG GCCTCGACGC GAGCCAGCTC AAGTACGTGC AGCAGATCGA GCGCAACACG
CAAAAGCGCA TCGACGCGAT CCTCGCGCCG ATCTTCGGCG CCGGCAACGC GCGCTCGCAG
GTGAGCGCCG ACGTCGACTT CTCGAAGATC GAGCAGACCT CGGAGAGCTA CGGCCCGAAC
GGCACGCCGC AGCAGAGCGC GATCCGCAGC CAGCAGACGA GCAGTTCGAC CGAGCTCGCG
CAAAGCGGCG CGTCGGGCGT GCCGGGCGCG CTGTCGAACA CGCCGCCGCA GCCCGCGTCC
GCGCCGATCG TCGCGAGCAA CGGCCAGCCG GCCGGCCCGG CCGCGACGCC CGTCAGCGAC
CGCAAGGATT CGACGACGAA CTACGAGCTC GACAAGACCG TGCGGCACGT CGAGCAATCG
ATGGGCACGA TCAAGCGGCT GTCGGTCGCG GTGGTCGTCA ACTATCAGCC GAGCACCGAC
GCGAAGGGCC GCGTGACGAT GCAGCCGCTC GCCGCGGACA AGCTCGCGCA GGTCCAGCAG
CTCGTGAAAG ACGCGATGGG CTACGACGAG AAGCGCGGCG ATTCGGTCAA CGTCGTCAAC
AGCGCGTTCT CGGCCGCGGC CGATCCGTTC GCGAACCTGC CGTGGTGGCG CCAGCCGGAC
ATGATCGAAC TCGGCAAGGA CATCGCGAAA TGGCTGGGCG TCGCCGCGGC GGCCGCCGCG
CTGTACTTCA TGTTCGTGCG CCCGGCGCTG CGCCGCGCGT TCCCGCCGCC CGCGGAGCCC
GCGGCGGCCG CCGTGCCGGC GCTCGACGGC CCGGACGACA TGCTCGCGCT CGACGGCCTG
CCGAGCCCCG ACAAGAAGCA GCTTGCCGAG GAGGACGAAG AGCATCCGGC GCTCCTCGCC
TTCGAAAACG AGAGGAACCG CTACGAACGC AATCTCGACT ACGCGCGCAC GATCGCGCGC
CAGGATCCGA AGATCGTCGC AACCGTCGTG AAGAACTGGG TGTCCGATGA ACGCTGA
|
|---|
| Protein sequence | MDSQANSLIN PDARSSLAGA SPQAAAAAGA LPGAAAGGAD FGLGGFAERI PGLSRMKTNP
RLPFLIGAAL AIAAIVALVL WSRAPDYRVL YSNLSDRDGG AIIAALQQAN VPYKFADAGG
AILVPANQVH ETRLKLAAMG LPKGGSVGFE LMDNQKFGIS QFAEQVNYQR ALEGELQRTV
ESSNAVRAAR VYLAIPKPSV FVRDREAPSA SVLVDLYPGR VLDEGQVLAV TRMVSSSVPD
MPAKNVTIVD QDGNLLTQTA SATGLDASQL KYVQQIERNT QKRIDAILAP IFGAGNARSQ
VSADVDFSKI EQTSESYGPN GTPQQSAIRS QQTSSSTELA QSGASGVPGA LSNTPPQPAS
APIVASNGQP AGPAATPVSD RKDSTTNYEL DKTVRHVEQS MGTIKRLSVA VVVNYQPSTD
AKGRVTMQPL AADKLAQVQQ LVKDAMGYDE KRGDSVNVVN SAFSAAADPF ANLPWWRQPD
MIELGKDIAK WLGVAAAAAA LYFMFVRPAL RRAFPPPAEP AAAAVPALDG PDDMLALDGL
PSPDKKQLAE EDEEHPALLA FENERNRYER NLDYARTIAR QDPKIVATVV KNWVSDER
|
|---|
| |