Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_A1721 |
Symbol | |
ID | 4790828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008836 |
Strand | - |
Start bp | 1766877 |
End bp | 1768325 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_001027701 |
Protein GI | 124385874 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.456925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCGA TGAAGCCCGC ACGCACCCTC GCCATGGCCG GCGCGCTCGC GCTCTTCGCA TCGCAAGCGG TGCACGCGCA ATGGCTCGAT CTCTACGGAA CCCGAAAGAA TGTGTCGGCT TCTCCCGCCG CGCCGATGCT GAAGAACGCG ACATGCCAGC CCGAGCTCGC GGACCGTCCG ATCGAGCTCG AAGACGCGAT CCTGCAGGCG ATCTGCGCGA ACCCGCAGGC ACGGCGCGCG TGGGCCGATG CGCGCGCGCA GGCCGCCCAG CTCGGCGTGA AGGAGGCGGC GTATCTGCCG ACGCTCAATG CAACAGCGGG CATTCAGCGC AACTGGCAAA CGACGACGTA CGAGCAGGAC CTCGGCCCGA TCACGCTCAC CGCCGACCAG AAGCAGATCC AGACGAGCCG CTACGGCGCG TTGAACCTGA GCTGGGTGCT GTTCGATTTC GGCAAGCGCA GCGCGGCGCT CAGGCAGGCG CGCGAGCTCC TCGCCGCCGC CAACGCGACG CAGGACGACA CGCTCCAGAC CCTCCTGTTC AATGCCGCCC AGGCGTATTA CAACCTGCGC GACACGCAGG CAGCGCTTGA CGCGGCGCGC ACGACCGAAC GCGTCGCGCA GGATAGCCTC ACCGCGGCGA AGGCGAAGCA CGACGCCGGC GCCGGCACGC TGAGCGATCA ACTGCAGGCG CAAACGAGCT ATCGCCGCGC GGTGCTCGAT CGCGTGAGCG CCGAAGGCGA CGTGCGGAAC GCGACGGGCG TGCTCGCCGT CGCGATGGGG CTCGACGCGA ACACGCCGCT GCGGATCGCG ACCGCCGAGC CGCCGGTCGA TCGCAACGCG TTCGCCGAAG GCATCGCGCA ATTGATCGAC GAGGCGAAGC GGCAGCATCC GAAGCTCGTC GCCGCGCGCG CGAAACTCGA CGCGGCGCGC GCGAACGTCG ATGCGGTGCG TGCGCAGGGC CGCCCGACCA TCTCGCTGAC CGGCAGCCTC AGCCGCAACA GCCCGTCGTA TCAGCAGCAG CCGGGCATCC AGACCACCGC GAGCCACGGC AGCATGATCG GCGTGCAGGT GACGATCCCG CTCTTCGAAG GCTTCGCGTC CGGCTACCGC GTCGCGGCCG CGCAGGCGCA GGCGGATGCG CAGGAGGCCG ACGTGCAGAA CACCGAGCTG AACGTCTCGC TCGACGTGTG GAAGAGCTAT CAGAGCCTGC AGACCGACAC CGCGAATCTC GACAATTCGA AGGACCTGCT CGGCGATGCG CAACGCTCGC TCGACATCGC ACGGGGCCGG TACAAGGCGG GCGTCGGCAC GTTCACGGAG TTGCTCAATG CGCAGACCGC GCTCGCGGAC GCGCAGAAGC AGCGCGTGCA GGCGCTGTCG AAATGGCGCA CCGCGCGGCT CAAGCTCGCG GCGAGCCTCG GCAGCATCGG CCTGTGGTCC GCCCATTGA
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Protein sequence | MIAMKPARTL AMAGALALFA SQAVHAQWLD LYGTRKNVSA SPAAPMLKNA TCQPELADRP IELEDAILQA ICANPQARRA WADARAQAAQ LGVKEAAYLP TLNATAGIQR NWQTTTYEQD LGPITLTADQ KQIQTSRYGA LNLSWVLFDF GKRSAALRQA RELLAAANAT QDDTLQTLLF NAAQAYYNLR DTQAALDAAR TTERVAQDSL TAAKAKHDAG AGTLSDQLQA QTSYRRAVLD RVSAEGDVRN ATGVLAVAMG LDANTPLRIA TAEPPVDRNA FAEGIAQLID EAKRQHPKLV AARAKLDAAR ANVDAVRAQG RPTISLTGSL SRNSPSYQQQ PGIQTTASHG SMIGVQVTIP LFEGFASGYR VAAAQAQADA QEADVQNTEL NVSLDVWKSY QSLQTDTANL DNSKDLLGDA QRSLDIARGR YKAGVGTFTE LLNAQTALAD AQKQRVQALS KWRTARLKLA ASLGSIGLWS AH
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