| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A0317 |
|---|
| Symbol | |
|---|
| ID | 4792988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008836 |
|---|
| Strand | - |
|---|
| Start bp | 348469 |
|---|
| End bp | 349668 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | periplasmic multidrug efflux lipoprotein precursor |
|---|
| Protein accession | YP_001026319 |
|---|
| Protein GI | 124385123 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00333189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACG AATGGGCACG CACGCGCCGC TTGTCGGCGG CGCTCGCGGT CGCGGCGTTC
GTCGCGGCCG GCTGCGGCAA GCACGAAAGC GAGCACGACG CCGCCGCGCC GCGCGAGGCG
AGCGTCGTCA CGGTGAAGAA GACATCGGTG CCGCTGTCGG TCGAATTGCC GGGCCGGCTC
GACGCGTACC GGCAGGCCGA GGTGCGCGCG TGGGGCGCGG GCATCGTGAC CGCGCGCACC
TACGAGGAAG GGCAGGAAGT CAAGCGCGGC GCGGTGCTGT TCAGGATCGA TCCCGCGCCG
TTCAAGGCGG CGCGCGACGC GGCCGCGGGC GCGCTCGAGA AGGCGCGGGC CGCGCACCTC
GCGGCGCTCG ACAAGCGCCG CCGCTACGAC GAGCTCGTGC GCGACCGCGC GGTCAGCGAG
CGCGACCACA CCGAGGCGCT CGCCGACGAA CGGCAGGCGA AGGCGGCCGT CGCGTCGGCG
CGCGCGGAGC TCGCGCGCGC GCAACTGCAG CTCGATTACG CGACCGTCAC CGCGCCGATC
GACGGCCGCG CGCGCCGCGC GCTCGTGACC GAAGGCGCGC TCGTCGGCCA GGATCAGGCG
ACGCCGCTCA CGACCGTCGA GCAGCTCGAT CCGATCTACG TGAACTTCTC GCAGCCCGCG
GCCGACGTCG AATCGCTGCG GCGCGCGGTG AAGAGCGGAC GCGCGGCGGG CATCGCGCAG
CAGGACGTCG AGGTGACGCT CGTGCGCCCG GACGGCAGCA CGTACGCGCG CAAGGGCAAG
CTGCTGTTCG CGGATCTTGC CGTCGACCCG TCCACCGACA CGGTGGCGAT GCGTGCGCTC
TTTCCGAACC CGGAGCGCGA ACTGCTGCCC GGCGCGTACG TGCGGATCGC GCTCGATCGC
GCGGTCGCGC GCGACGCGAT CCTCGTGCCG CGCGACGCGC TGCTGCGCAC GGCCGACAGC
GCGACCGTCA AGGTCGTCGG CCAGAACGGC AAGATACGCG ACGTGACGGT CGAGGCCGCG
CAGATGAAAG GCCGCGACTG GATCGTCACG CGCGGGCTCG CGGGCGGCGA GCGCGTCGTC
GTCGTCGACG CCGCGCAATT CGAAGCAGGC ACGACGGTGA AGGCGCTCGA GCGCGGCGCC
GCCGCGCAGC CGGCCTCCGG CGCCGCCGCG GCTTCCGCGC CCGGCCGGCG CTCAACCTGA
|
|---|
| Protein sequence | MKYEWARTRR LSAALAVAAF VAAGCGKHES EHDAAAPREA SVVTVKKTSV PLSVELPGRL
DAYRQAEVRA WGAGIVTART YEEGQEVKRG AVLFRIDPAP FKAARDAAAG ALEKARAAHL
AALDKRRRYD ELVRDRAVSE RDHTEALADE RQAKAAVASA RAELARAQLQ LDYATVTAPI
DGRARRALVT EGALVGQDQA TPLTTVEQLD PIYVNFSQPA ADVESLRRAV KSGRAAGIAQ
QDVEVTLVRP DGSTYARKGK LLFADLAVDP STDTVAMRAL FPNPERELLP GAYVRIALDR
AVARDAILVP RDALLRTADS ATVKVVGQNG KIRDVTVEAA QMKGRDWIVT RGLAGGERVV
VVDAAQFEAG TTVKALERGA AAQPASGAAA ASAPGRRST
|
|---|
| |