| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_2146 |
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| Symbol | oprC |
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| ID | 4789529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10229 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008835 |
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| Strand | + |
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| Start bp | 2194016 |
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| End bp | 2195548 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | outer membrane efflux protein OprC |
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| Protein accession | YP_001025939 |
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| Protein GI | 124383029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA CCAACATCAA CGAACGCATC GCGCGCGTCG CGAAGATCGC GGCGGCGAGC
GGGTTGCTCG TCGCGCTGCT CGCCGCGTGC GCGGTGGGGC CCGACTACCG GCGGCCCGAT
GTCGCGACGC CCGCGGCGTT CAAGGAAGCG CCGGCGCTCG CGCCGGGCGA GCAGGCCGGC
ACGTGGAAGG CGGCCGAGCC GGCCGACGCC GCGCATCGCG GCGAATGGTG GCGCGTATTC
GGCGATCCGG TGCTCGATGC GCTCGAAACG CAGGCGCTTG CCGCGAACCA GAACCTGAAG
GCCGCGGCGG CGCGCGTCGA GCAGGCGCGC GCGGCGACCC GCGCCGCGCG CTCGCAGTGG
TTCCCGCAAG TGGGCGTGGG CTTCGGGCCG ACGCGCGAGG GGCTGTCGTC GGCGTCGCAG
TTCCAGCCGC AGGGCAGCGG CCCGACGAAC GCGACGCTCT GGCGCGCGCA GGGCACGGTG
TCGTACGAAG CGGACCTGTT CGGCCGCGTC GGCCGCAACG TCGAAGCGTC GCGCGCGGAC
GAAGCGCAGA GCCAGGCGCT GTTCCGCTCG GTGCAGCTCG CGTTGCAGGC GGACGTCGCG
CAGAACTACT TCGAGCTGCG CCGGCTCGAT TCCGACCAGG ATCTGTACCG GCGCACGGTC
GGGCTGCGCG AGGAGGCGCT CAAGCTCGTG CAGCGGCGCT TTGCCGAAGG CGACATCAGC
GAGCTCGACG TGTCGCGCGC GAAGAACGAA CTGGCGACCG CGCAGGCGGA CGCGGTGGGC
GTCGCGCGGC GGCGCGCCGC ATCGGAGCAT GCGCTCGCGA TCCTGCTCGG CAAGGCGCCC
GCGGATTTCT CGTTCAGCGA GACGCCGATC GCGCCGGTGG CGGTGCGCGT GCCGGCGGGG
CTGCCGTCGG CATTGCTCGA GAGGCGGCCC GACATCGCGG CGGCCGAGCG CGCGATGATG
GCCGCGAACG CGCGCATCGG CCTCGCGAAG TCCGCGTACT TCCCGAAGCT CGACATCACC
GGCGCGTTCG GCTATGAGGC GGCGACGCTC GGCAACCTGT TCCTGTGGTC GAGCCGCACG
TTCCTGCTCG GGCCGTTCGC GGGCACGGCG CTCACGCTGC CGATCTTCGA CGGCGGGCGC
CGCAGCGCGG GCGTCGCGCA GGCGCGCGCG AAGTATGACG AGGAAGTCGC GAACTACCGG
CAGCAGGTGC TCGTCGCGTT CCGCGAAGTG GAGGACAACC TTGCCGATCT GCGTCTGCTC
GACGATCAGA TCCGCGCGCA AAGCGACGCC GTCAACGCGT CGCGGCGCGC GGCGAAGCTG
TCGCGCACGC AGTATCAGGA AGGCGCGGTC AGCTATCTCG ACGTGATCGA CAGCGAGCGC
TCGGTGCTCG AATCGCAACT GCAATCGAAC CAGTTGACGG GCACGCAGGC GGTATCGACG
GTCAACCTGA TTCGCGCGCT CGGCGGCGGC TGGGGGAGCG ATGCGGCGCT CGGCTCGCGC
GAGCCGGGCA AGCAGGACGT CGCGGCGCGT TGA
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| Protein sequence | MNKTNINERI ARVAKIAAAS GLLVALLAAC AVGPDYRRPD VATPAAFKEA PALAPGEQAG
TWKAAEPADA AHRGEWWRVF GDPVLDALET QALAANQNLK AAAARVEQAR AATRAARSQW
FPQVGVGFGP TREGLSSASQ FQPQGSGPTN ATLWRAQGTV SYEADLFGRV GRNVEASRAD
EAQSQALFRS VQLALQADVA QNYFELRRLD SDQDLYRRTV GLREEALKLV QRRFAEGDIS
ELDVSRAKNE LATAQADAVG VARRRAASEH ALAILLGKAP ADFSFSETPI APVAVRVPAG
LPSALLERRP DIAAAERAMM AANARIGLAK SAYFPKLDIT GAFGYEAATL GNLFLWSSRT
FLLGPFAGTA LTLPIFDGGR RSAGVAQARA KYDEEVANYR QQVLVAFREV EDNLADLRLL
DDQIRAQSDA VNASRRAAKL SRTQYQEGAV SYLDVIDSER SVLESQLQSN QLTGTQAVST
VNLIRALGGG WGSDAALGSR EPGKQDVAAR
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