| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3787 |
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| Symbol | |
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| ID | 4785956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 4004787 |
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| End bp | 4006790 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640092370 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001022975 |
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| Protein GI | 124268971 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000431076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTCTATC CCCAGGAATT CGACGTGATC GTCGTCGGTG GCGGCCATGC TGGCACCGAG
GCGGCGCTCG CCGCGGCGCG GATGGGCTGT GCAACGCTGC TGCTCACGCA CAACATCGAG
ACGTTGGGGC AGATGAGCTG CAACCCGTCG ATCGGTGGCA TCGGCAAGGG ACATCTCGTC
AAGGAAATCG ACGCGCTTGG TGGTGCGATG GCCCTGGCGA CCGACGAGGC GGGCATCCAG
TTCCGCATCC TGAATGGTTC CAAGGGTCCG GCGGTGCGTG CCACGCGGGC GCAGGCCGAT
CGTGTGCTCT ACAAGGCGGC CATCCGCCGC CGGCTCGAGA ACCAGCCGCG GCTGTGGCTG
TTCCAGCAGG CGGTCGATGA CCTGATCGTC GAGGGCGACC GCGTGATAGG TGCCGTGACG
CAAGTAGGCG TTCGCTTTCG TAGCAAGGCT GTGGTACTGA CGGCGGGCAC CTTTCTCGAC
GGTCGTATTC ACGTCGGTTT GCAGAACTAT GCGGCCGGGC GTGCCGGCGA TCCGCCGGCG
CAGAGCCTGT CGGCCCGGCT CAAGGAATTG CAGCTGCCGC AGGGTCGGCT GAAGACCGGC
ACGCCGCCGC GCATCGATGG CCGCACGATC GACTTCGAGC GGTTGCTGGA ACAGCCGGGC
GATGCCGATC CGGTCCCGGT GTTCAGCTAC ATGGGCGATG CGGCGATGCA CCCGCGGCAG
CTGCCATGCT GGATCACCCA CACCAGCGAA CGCACCCACG AGATCATCCG CAGCGGCTTC
GACCGCAGCC CGATGTTCAC CGGCGTGATC GAAGGGGTGG GGCCGCGCTA CTGCCCCAGC
ATCGAGGACA AGGTGAACCG CTTCGCCGAC AAGACCTCGC ACCAGATCTT CCTGGAGCCC
GAAGGGTTGA GCACGCACGA GTTCTACCCG AACGGTATCT CCACATCGCT GCCCTTCGAT
ATCCAGCTCG CGGCGCTGCG CTCGATGTCC GGGCTGGAAC AGGCACACAT CCTGCGGCCC
GGCTATGCGA TCGAGTACGA CTACTTCGAT CCACGCGGGC TGAAGTCGAG CTTCGAGACC
AAGGCGATCG GCGGCCTGTT CTTCGCCGGC CAGATCAACG GCACAACCGG CTACGAGGAG
GCGGCGGCGC AGGGGCTGTT CGCCGGCGTC AACGCGGCGC GGCAGGTGCA GGAACTCGAC
GCCTGGCTGC CCCGGCGCGA CCAGGCCTAT CTGGGCGTGC TGGTCGACGA TCTCATCACG
AAAGGCGTGA CCGAGCCCTA TCGCATGTTC ACCAGCCGCG CGGAGTTCCG CTTGCAACTG
CGGGAAGACA ACGCCGACCT GCGGCTGACC GACGCCGGGC GCGAGATGGG CCTGGTCGAC
GACGAACGCT GGGCGGCGTT CAACCGCAAG CGAGATGCTG TTTCACGTGA AACCGAGCGC
CTGAAGTCCA CCTGGGTGAA TGCCGCGCTG CTGCCAGCGG CCGACGCCGA GCGTCTGGTC
GGCAAAGCGC TGGAGCACGA GTACGCACTG GTCGACCTGC TGCGCCGACC GGGGGTCGAC
TTCGACGCAG TGGCCGAGGT CGCGCAGATC GCCCACGCAA GGCGGAGTGA GGGGCGGCAG
GCCGACGATC CGGCGGCCGC GGCCTGGTCG CGGGCGGCGT TGCGCAACGA GTGGGGGCCG
GCTCTGGCCG ACGCCGTGAT CCAGCAACTG GAGACCGCAA CCAAGTACGC CGGCTACATC
GACAAGCAGA ACGAACAGGT CGAGCGCGCG GCGCAGTATG AAGACCTCAA GCTGCCGGAG
TCGCTCGATT ACCGACAGGT CGCGGCGCTG AGCCACGAGG TCCGCCAGAA GCTCCAGGCG
CTGCGCCCTG AAACGCTGGG GCAAGCCGCA CGCGTCTCGG GCGTGACGCC GGCGGCGATC
TCCCTGCTGC TGATCCACTT GAAGAAGGGC CGCCATCGCG GCTTCGGCGC TGATGCTGCC
GAGCCGGGCA GCGCGGCCGC ATGA
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| Protein sequence | MLYPQEFDVI VVGGGHAGTE AALAAARMGC ATLLLTHNIE TLGQMSCNPS IGGIGKGHLV
KEIDALGGAM ALATDEAGIQ FRILNGSKGP AVRATRAQAD RVLYKAAIRR RLENQPRLWL
FQQAVDDLIV EGDRVIGAVT QVGVRFRSKA VVLTAGTFLD GRIHVGLQNY AAGRAGDPPA
QSLSARLKEL QLPQGRLKTG TPPRIDGRTI DFERLLEQPG DADPVPVFSY MGDAAMHPRQ
LPCWITHTSE RTHEIIRSGF DRSPMFTGVI EGVGPRYCPS IEDKVNRFAD KTSHQIFLEP
EGLSTHEFYP NGISTSLPFD IQLAALRSMS GLEQAHILRP GYAIEYDYFD PRGLKSSFET
KAIGGLFFAG QINGTTGYEE AAAQGLFAGV NAARQVQELD AWLPRRDQAY LGVLVDDLIT
KGVTEPYRMF TSRAEFRLQL REDNADLRLT DAGREMGLVD DERWAAFNRK RDAVSRETER
LKSTWVNAAL LPAADAERLV GKALEHEYAL VDLLRRPGVD FDAVAEVAQI AHARRSEGRQ
ADDPAAAAWS RAALRNEWGP ALADAVIQQL ETATKYAGYI DKQNEQVERA AQYEDLKLPE
SLDYRQVAAL SHEVRQKLQA LRPETLGQAA RVSGVTPAAI SLLLIHLKKG RHRGFGADAA
EPGSAAA
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