| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3786 |
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| Symbol | gidB |
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| ID | 4785955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 4004125 |
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| End bp | 4004790 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640092369 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001022974 |
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| Protein GI | 124268970 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.393771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000261644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACGGTGG CCCCTTTCGA CGCAAAGGCG CTGGCGCAAG GACTGGAGCA GGGCGCGCAG
GCGCTGAGAC TCGAGCTGAC AGCGGTGCAG CAACAGCAAC TGCTGCAGCA CCTGGCGCTG
ATCGACCGCT GGAACCGGGT CTACAACCTC ACCGCGGTGC GCGAGCCGGC GCAGATGCTG
ACCCAGCACC TGCTCGACAG CTTGGCGGTC GTCGCGCCGC TGCGACGGCA AACACGAGCG
ACGGCGATCG CGTTGCTCGA TGTCGGCAGC GGGGCAGGAC TGCCCGGTGT GGCGATTGCG
GTCGCTTGCC CGGAAATCCA TGTCAGCTGT GTAGACACGG TCTCGAAGAA GGCCAGTTTC
ATCCGGCAGG TGGGGGTGGA GCTTGGGCTG ACGCATTTCC AGGCGCTGCA TGCCCGGGTG
GAATCCTTGG CGTCGAGCAA TTTCGACGTG ATCACCTCCC GCGCCTTCGC CTCGCTGGCC
GACTTTGTCA CGCTCACCGA GGCGGCGCTT GCGCCCGACG GTGTGTGGAT GGCGATGAAG
GGTCAGGTCC CGCACGAGGA AATGGCAGTC TTGCCGTCGT CGATCGAGGT GTTTCACGTG
GAACCCTTGC AGGTGCCCGG GCTGGATGCC GAGCGCTGCA TCGTCTGGAT GCATCGAAAG
GGCTGA
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| Protein sequence | MTVAPFDAKA LAQGLEQGAQ ALRLELTAVQ QQQLLQHLAL IDRWNRVYNL TAVREPAQML
TQHLLDSLAV VAPLRRQTRA TAIALLDVGS GAGLPGVAIA VACPEIHVSC VDTVSKKASF
IRQVGVELGL THFQALHARV ESLASSNFDV ITSRAFASLA DFVTLTEAAL APDGVWMAMK
GQVPHEEMAV LPSSIEVFHV EPLQVPGLDA ERCIVWMHRK G
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