| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3710 |
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| Symbol | |
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| ID | 4786059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3921181 |
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| End bp | 3924114 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640092293 |
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| Product | NAD-dependent formate dehydrogenase alpha subunit |
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| Protein accession | YP_001022898 |
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| Protein GI | 124268894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.749683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.699855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC CCCACGCCGA GATCGACTAC GGCACCCCGG CCAGCGCGTC GACGCAGGCC
GTCACGCTCG AGATCGACGG CCAGGCCGTC ACCGTGCCGG CCGGCACCTC GCTGATGCGC
GCGGCGATCG ACGCCGGCGT GCAGGTGCCC AAGCTGTGCG CGACCGACAG CCTGGAGCCC
TTCGGCTCGT GCCGCCTGTG CCTGGTCGAG ATCGAGGGCC GCCGCGGCTA CCCGGCCTCG
TGCACCACGC CGGCCGAGGC CGGCATGAAG GTGCGCACGC AGAGCCCGAA GCTGCAGGAG
CTGCGCAAGG GGGTGATGGA GCTCTACATC TCCGACCACC CGCTCGACTG CCTGACCTGC
GCCGCCAACG GCGACTGCGA GCTGCAGGAC ATGGCCGGCG TGACCGGCCT GCGCGAGGTC
CGCTACGGCG TCGGTGACCA GTACGGCGGC GCCCACCACC TGAAGAGCGC GAAGGACGAG
TCGAACCCGT ACTTCACCTA CGACCCGAGC AAGTGCATCG TCTGCAACCG CTGCGTGCGC
GCCTGCGAGG AGACCCAGGG CACCTTCGCG CTGACGATCA GTGGCCGCGG CTTCGAGTCG
CGCGTGTCGG CGGGCCAGGA CCAGCCCTTC ATGGAAAGCG AGTGCGTCAG CTGCGGCGCC
TGCGTGCAGG CCTGCCCGAC CGCCACGCTG CAGGAGAAGT CGGTCATCTG GCTGGGCCAG
GCCGAGCACA GCGTCACCAC CACCTGTGCC TACTGCGGCG TCGGCTGCGG CTTCAAGGCC
GAGATGAAGG GCAACGAGGT CGTGCGCATG GTGCCGTGGA AGAACGGCCA GGCCAACGAA
GGCCACTCCT GCGTCAAGGG CCGCTTCGCC TGGGGCTACG CGACCCACAA GGACCGCATT
ACCACGCCGA TGATCCGCAA GCGCATCACC GACCCGTGGC AGGAGGTGAG CTGGGACGAG
GCGATCGGCT ATGCCGCCAG CGAGTTCAAG CGCATCCAGG CGAAGTACGG GCGCGACGCG
ATCGGCGGCA TCGTCTCCTC GCGCTGCACC AACGAGGAAG GCTATCTGGT GCAGAAGCTG
GTACGCGCGG CCTTCGGCAA CAACAACGTC GACACCTGCG CGCGCGTGTG CCACTCACCG
ACCGGCTATG GCCTGAAGCA GACGCTGGGC GAATCGGCCG GCACGCAGAC CTTCAAGTCG
GTGGAGAAGT CGGACGTGAT CATGGTCATC GGTGCCAACC CGACCGACGG CCACCCGGTG
TTCGCCTCGC GCATGAAGAA GCGACTGCGC GAAGGCGCGA AGCTGATCGT CGTCGACCCG
CGCAGGATCG ACCTGGTGAA GTCGCCGCAC GTGAAGGCCG ACCACCATCT TCAGCTGCGT
CCGGGCACCA ACGTCGCGGT GATCACCGCG CTGGCGCACG TGATCGTCAC CGAGGGCTTG
CTCGACGAGG CTTACATCGC CGAACGCTGC GAGGACAAGG CCTTCCGCGA GTGGCGCGAG
TTCGTGTCGC GCGATGCCAA CTCCCCTGAG GCGACCGCCG TCGTCACCGG CGTGCCGGCC
ACCGAGCTGC GCGCCGCCGC CCGACTGTTC ACCACCGGCA GATCCGACGG CACGGCTGCC
ACGCTGCAGG CCCGCGGGGC GCGGCCCAAC GCCGCCATCT ACTACGGCCT GGGCGTGACC
GAGCACAGCC AGGGTTCGAC GATGGTGATG GGCATCGCCA ACCTCGCGAT GGCCACCGGC
AACGTCGGCC GCGAGGGGGT GGGCGTGAAC CCGCTGCGCG GCCAGAACAA CGTGCAGGGT
TCGTGCGACA TCGGCTCCTT CCCGCACGAG TTGCCGGGCT ACCGCCACGT GTCGGACAGC
AGCACGCGGG CGCTGTTCGA GAACGCCTGG AACGTCGAGC TGCAGCCCGA ACCCGGCCTG
CGCATCCCCA ACATGTTCGA CGCCGCGCTG TCGGGCAGCT TCATGGGCCT GTACTGCGAG
GGCGAGGACA TCGTGCAGTC CGACCCGGAC ACGCAGCACG TCGCGCATGC GTTGTCCTCC
ATGGAATGCA TCGTCGTGCA GGACCTGTTC CTGAACGAGA CCGCGAAGTA CGCGCACGTC
TTCCTGCCGG GCTCGTCCTT CCTGGAGAAG GACGGCACCT TCACCAACGC CGAGCGCCGC
ATCTCGCGCG TGCGCAAGGT GATGCCGCCC AAGGCAGGCC TCGCCGACTG GGAGGTGACG
GTGAAGCTGT CGAACGCGCT CGGCTACCCG ATGGACTACA CCCACCCCGA GCAGATCATG
GCCGAGATCG CCGCGCTGAC GCCCACCTTC TCCGGCGTCA GCTACGAGAA GCTCGACCGT
CTGGGCAGCA TCCAGTGGCC GTGCAACGAT GAGGCCCCCG AGGGCACGCC GACGATGCAC
ATCGACCGCT TCGTGCGCGG CAAGGGCAAG TTCTTCATCA CGCAGTACGT CGCCTCCGAC
GAGAAGGTCA CGCGCCGGTT CCCGCTGCTG CTGACGACAG GGCGCATCCT GTCGCAGTAC
AACGTCGGCG CGCAGACGCG CCGCACCGAG AACAACCAGT GGCACAGCGA GGACCGGCTG
GAGCTGCACC CGCACGACGC CGAGGAGCGC GGCATCCGGG ACGGCGACTG GGTCGGCATC
GAGAGCCGCT CGGGCCAGAC CGTGCTGCGC GCGCAGGTCA GCGACCGCAT GCAGGCCGGC
GTGGTCTACA CGACCTTCCA CTTCCCCGAG TCGGGCGCCA ACGTCATCAC CACCGACAGC
TCCGACTGGG CCACCAACTG CCCCGAGTAC AAGGTGACCG CGGTGCAGGT GCTGCCGGTG
ATGCAGCCTT CGGGCTGGCA GAAGGCCTAC AGCCGCTTCA CCGAGGTGCA GGAGCGCCTG
CTCGCCGAAC GGCACAAGGC CGAGCCGGCC CTCGCCGGCG CGAAGAAGCC ATGA
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| Protein sequence | MLDPHAEIDY GTPASASTQA VTLEIDGQAV TVPAGTSLMR AAIDAGVQVP KLCATDSLEP
FGSCRLCLVE IEGRRGYPAS CTTPAEAGMK VRTQSPKLQE LRKGVMELYI SDHPLDCLTC
AANGDCELQD MAGVTGLREV RYGVGDQYGG AHHLKSAKDE SNPYFTYDPS KCIVCNRCVR
ACEETQGTFA LTISGRGFES RVSAGQDQPF MESECVSCGA CVQACPTATL QEKSVIWLGQ
AEHSVTTTCA YCGVGCGFKA EMKGNEVVRM VPWKNGQANE GHSCVKGRFA WGYATHKDRI
TTPMIRKRIT DPWQEVSWDE AIGYAASEFK RIQAKYGRDA IGGIVSSRCT NEEGYLVQKL
VRAAFGNNNV DTCARVCHSP TGYGLKQTLG ESAGTQTFKS VEKSDVIMVI GANPTDGHPV
FASRMKKRLR EGAKLIVVDP RRIDLVKSPH VKADHHLQLR PGTNVAVITA LAHVIVTEGL
LDEAYIAERC EDKAFREWRE FVSRDANSPE ATAVVTGVPA TELRAAARLF TTGRSDGTAA
TLQARGARPN AAIYYGLGVT EHSQGSTMVM GIANLAMATG NVGREGVGVN PLRGQNNVQG
SCDIGSFPHE LPGYRHVSDS STRALFENAW NVELQPEPGL RIPNMFDAAL SGSFMGLYCE
GEDIVQSDPD TQHVAHALSS MECIVVQDLF LNETAKYAHV FLPGSSFLEK DGTFTNAERR
ISRVRKVMPP KAGLADWEVT VKLSNALGYP MDYTHPEQIM AEIAALTPTF SGVSYEKLDR
LGSIQWPCND EAPEGTPTMH IDRFVRGKGK FFITQYVASD EKVTRRFPLL LTTGRILSQY
NVGAQTRRTE NNQWHSEDRL ELHPHDAEER GIRDGDWVGI ESRSGQTVLR AQVSDRMQAG
VVYTTFHFPE SGANVITTDS SDWATNCPEY KVTAVQVLPV MQPSGWQKAY SRFTEVQERL
LAERHKAEPA LAGAKKP
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