Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3664 |
Symbol | glpD |
ID | 4786071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3874344 |
End bp | 3875924 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640092246 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_001022852 |
Protein GI | 124268848 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0488098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAG TGGAACAACC CAGGTCCGAC CCGTCCCGTG AGCCGCGGCA CTGCGACGTG CTCGTCGTCG GTGGCGGCAT CAATGGCACG GGCATCGCGC GCGACCTGGC GGGCCGCGGC TGGCGCGTCG TGCTGTGCGA ACGCGACGAT CTGGCGGCGC AGACCTCGTC GGCCTCCACC AAGCTGATCC ACGGCGGCCT GCGCTACCTG GAGCACGGCG AGTTCGCGCT GGTGCGCAAG GCGCTGCAGG AGCGCGAGCA GCTGCTGCGC AGCGCGCCGC ACATCATGTG GCCGCTGTCC TTCGTGATGC CGCACGACGC GGCCATGCGG CCGGCGTGGA TGATCCGCGC CGGCCTGTTT CTCTACGACC ACCTCGCGCG TCGCGACTGG CTGCCCGGCT CGCACGGCGT CGACCTGCGC CGCCACCCGG CTGGCGTGCC GCTGCAGCCG CGGCTGACGC GCGGCTTCGT CTACAGCGAC GGCTGGGTCG ACGATGCGCG GCTGGTGGTG CTGGCCGCGA TCGACGCCCG CGAACGCGGC GCCACGGTGC TGACGCGCTG CGCCTGCACC CGGGCGCAGC GCCATGCGGC CGGCTGGTGC GTCACGCTGC AGCGCGCGGG CGAGGCGGCG GTGGAGTGGC AGGCCCGCGC GCTGGTCAAC GCGGCCGGTC CCTGGGCCGC GAGCTTCCTG CGCGACACGG TGGTGTCGGC GCACGGCGAA GCACTCGCCA CGCGCCAGCT GCGGCTGGTG AAGGGCAGCC ACATCGTCGT GCCGCGGCTG TTCGACCACA CGCACGCCTA CCTGTTCCAG AACCCGGACC GCCGCATCGT CTTCGCCATC CCCTACGAGC GAGACTTCAC GCTGATCGGC ACCACCGACG TCGAACTGCA CGGTGACCCC GGCGACGCCA TCGCCAGCGA GGCCGAGATC GCCTACCTGT GCGAGCAGGT CAGCCGCTAC TTCGCGCGGC CGGTCGTGCC AGGCGACGTG CGCTGGTCCT ATGCCGGCGT GCGGCCCCTG CTCGACGAGG CCGACGGCGA CGAGGCGAGC GCCGTGACGC GCGACTACCT GCTCGAGACG CACGCCGACG GTGCCCCTCT GCTCACGGTC TGGGGCGGCA AGATCACCAC CTTCCGCAAG CTGGCCGAGG AAGCGGCGGG CGCCATCGGG CGCCTGCTCG GCGACGAACG CGCCGCGTGG ACTGCGTCGG CAGTGCTGCC CGGCGGGTAC CTGTCGGCCT GGACCGGCAT GCCGCCGAGC ACGCCGGCCG AGGACTTCGA GCGTTTCGTG AAGGCGATCG AGCGTCGGCA CGCCTGGCTG CCGACGCCGC TGGCCCTTCG GCTGGCTCGC GCCTACGGCA CGCGTGCGAC GGACTGGCTG GGCGAGGCCC GCTGCCTGGA CGACTTGGGG CTCGAGATCG CTCCCGGGCT GCACGAAGCC GAGCTGGCCC ATCTGCAGCG CGACGAGTGG GCCGTGACGG CCGACGACGC GCTCTGGCGG CGTTCCAAGC TCGGTCTTCA CCTCGACGCC CGCCAGCGCG CGGGCGTGAG CGACTGGTTC GCTGCACGCA CTGGCGCCTG A
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Protein sequence | MAAVEQPRSD PSREPRHCDV LVVGGGINGT GIARDLAGRG WRVVLCERDD LAAQTSSAST KLIHGGLRYL EHGEFALVRK ALQEREQLLR SAPHIMWPLS FVMPHDAAMR PAWMIRAGLF LYDHLARRDW LPGSHGVDLR RHPAGVPLQP RLTRGFVYSD GWVDDARLVV LAAIDARERG ATVLTRCACT RAQRHAAGWC VTLQRAGEAA VEWQARALVN AAGPWAASFL RDTVVSAHGE ALATRQLRLV KGSHIVVPRL FDHTHAYLFQ NPDRRIVFAI PYERDFTLIG TTDVELHGDP GDAIASEAEI AYLCEQVSRY FARPVVPGDV RWSYAGVRPL LDEADGDEAS AVTRDYLLET HADGAPLLTV WGGKITTFRK LAEEAAGAIG RLLGDERAAW TASAVLPGGY LSAWTGMPPS TPAEDFERFV KAIERRHAWL PTPLALRLAR AYGTRATDWL GEARCLDDLG LEIAPGLHEA ELAHLQRDEW AVTADDALWR RSKLGLHLDA RQRAGVSDWF AARTGA
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