| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3621 |
|---|
| Symbol | |
|---|
| ID | 4786147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3830144 |
|---|
| End bp | 3830875 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640092203 |
|---|
| Product | response regulatory protein |
|---|
| Protein accession | YP_001022809 |
|---|
| Protein GI | 124268805 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0192509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.145723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAAGG TCTATCTCGT CGAAGACGAT CCGCTGGTGG CCCAGCACGT GCTGGACACG
CTGAACGAAG CGCCGGGCAT CCGCTGCGTC GGCCACGCCA ACCGGCTTGG CATCGCCCGC
ATCGACCTGC CGCAGTGCCG CCCCGACGTG CTGCTGTCCG ACCTGGGCCT GCCCGACGGC
GACGGCACCG AGCTGATCGG CGAGCTGAGC CATGCGCCGG CGATCGACGG CGTGTGGCAC
CCGCACATCC TGGTGTTCTC GGTGTTCGGC GACGAGGCGC GCGTGATCCA GGCCATCGAG
GCCGGTGCCG ACGGATACTT CCTGAAGGGC TGCACCTCGG AGGAGCTGGT GCGCGCCGTC
GAGCAGGCCG CGCGCGGCGA GTCGCCCATC TCTCCGGCGA TCGCGCGCCA CCTGCTCAAG
CGCTTCCGCG AGGACGGCTT CAGCGAAACG AGTTTCCGCG ACTCGGGCTT CTCGGAGTTC
GGCGGTGGAG GAGGCGACAC CGGCATGATG GACCTCGACG AGCCCTCGCG CCGCGACCAC
GAGGTCAGCG CCCGCGAGCA CGAGGTGCTG CGGCTCGTGG CCCAGGGCTA CGTCAGCGAA
GAAATCGCCG AGCGCCTGCT GACCACGCCG AGCGCCGTGG CCACCGCGGT GCGCAACGTC
TACCGCAAGC TGCAGTTGGG GCAGCGCGCC CGCGCCACCG TGCAGGCGCA GTCGCGTCCC
GGCTGGGCGT GA
|
|---|
| Protein sequence | MLKVYLVEDD PLVAQHVLDT LNEAPGIRCV GHANRLGIAR IDLPQCRPDV LLSDLGLPDG
DGTELIGELS HAPAIDGVWH PHILVFSVFG DEARVIQAIE AGADGYFLKG CTSEELVRAV
EQAARGESPI SPAIARHLLK RFREDGFSET SFRDSGFSEF GGGGGDTGMM DLDEPSRRDH
EVSAREHEVL RLVAQGYVSE EIAERLLTTP SAVATAVRNV YRKLQLGQRA RATVQAQSRP
GWA
|
|---|
| |