Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3581 |
Symbol | |
ID | 4786166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3787659 |
End bp | 3789158 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640092163 |
Product | outer membrane protein OprN precursor |
Protein accession | YP_001022769 |
Protein GI | 124268765 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGACG CCCCTATCCC CCGGCTGCCC TTCCGTCTCG GCGTGCTGGC CGCGGCCGCC CTGATCGCCA CCGGCTGCGC GGTCGGTCCG AACTACGAGC GGCCCGCCCG CACGGTGGAT GCCGAATTCA TCAATGCCGG CGCGTCGGCC AACAACACCC AGCCGGTGTC GGCCGACATC GCCAGCTTCT GGCGCGGCTT CGGCGACGAG GCGCTGAGCA CGCTGGTCGA ACGCGCGCTG GCCGCCAACG GCGACGTGCG CATCGCGCAG GCACGCCTTC AGGAGGCACG CGCCGATCTC GGGCTGGCCC AGGCCGCGCT GCTGCCCGAC GTCGGCATCA GTGCCGGCGC GACGCGCGGC GTCACGCCGA TCACGCAGGC GCCGGGCCTG TCGCGCAGCG ACCGCACCGG CACGGTCTAC GACGCCGGCT TCGTCGCGAA CTGGGAGCTC GACTTCTTCG GCCGCAACCG CCGCGCCAGC GAGTCGGCCG CGGCGCTGGT CGCCGCCAGC GAGGCCGGCC TGCACGCGGC CCACACCGCG GTGGCCGCGG AGGTGGCGCG CAACTACCTG GAACTGCGCG GCCTGCAGCA GCGGCTGCAG GTCGCCGACA CCTCGCTGGT CAACCAGCGC GAGTCGCTGC GCATCACCGA GGCCCGGCTC GACGCCGGCC GCGGCACCCA GCTCGACATC GCGCGGGCGC GCACGCTGGT CGAGAACACC GAGGCCACGC GGCCCGCGCT GCAGGCCTCG ATCGACCGCA CGATCTACCG CCTGGCCACG CTGAGCGCGC AGCCGCCGCG CGCGCTGGCG ACCACGCTCG CGCCGCCGGC CGCGCTGCCC GGGTTGCCGG TGACCGACCT CTCGGCGCTG CCGCTGGGCA CCACGGAGGC TTGGCTGGCG CGCCGTCCGG ACCTGATCGC CGCCGAACGC CAGCTTGCCG CCGCCACCGC CAACATCGGC GTCGCCAAGG CCGATCTCTA TCCGCGCATC TCGCTGTCGG GCCTGCTGGG CCTGAATGCG GCCACGCTCG GTGACCTGGG CCGCAGCGAA TCGGCGATCT ACTCGCTGGG CGCGGGCCTG AGCTGGAGCG TGCTCGACTT CGGCCGGGTG CGCTCGCGCA TCGCCGCCAG CGAGGCACGC GCCCAGGCCA GCCTCGCGAG CTACGAGCAG ACGGTGGCGA CCGCGCTGGA GGAAACCGAA GGCGCGCTGA CGCAGTTCAC CCGCAACGCG CAGCGCGCCG AACGCCTGGA CCGCGCCGCG CGCAGCGCCG AGGAGGCCGC CGAGCTGGCC CGGCTGCGCT ACGACGCCGG CGTGACCGAC TTCCTGGTGG TGCTGGATGC CGAGCGCGAG GTGCTCGCCA GCCGCGATCA GCTGGTGCAG GCCCAGGTGG GCACGGCCAC CGCGCTGGTC AGCGTCTACC GCGCGCTGGG CGGCGGCTGG ACCGCCCCGA CCGATGCCGC CGCCGCGCCG GTGGCCGTCA GCAGCAACAG CCCCCGCTGA
|
Protein sequence | MRDAPIPRLP FRLGVLAAAA LIATGCAVGP NYERPARTVD AEFINAGASA NNTQPVSADI ASFWRGFGDE ALSTLVERAL AANGDVRIAQ ARLQEARADL GLAQAALLPD VGISAGATRG VTPITQAPGL SRSDRTGTVY DAGFVANWEL DFFGRNRRAS ESAAALVAAS EAGLHAAHTA VAAEVARNYL ELRGLQQRLQ VADTSLVNQR ESLRITEARL DAGRGTQLDI ARARTLVENT EATRPALQAS IDRTIYRLAT LSAQPPRALA TTLAPPAALP GLPVTDLSAL PLGTTEAWLA RRPDLIAAER QLAAATANIG VAKADLYPRI SLSGLLGLNA ATLGDLGRSE SAIYSLGAGL SWSVLDFGRV RSRIAASEAR AQASLASYEQ TVATALEETE GALTQFTRNA QRAERLDRAA RSAEEAAELA RLRYDAGVTD FLVVLDAERE VLASRDQLVQ AQVGTATALV SVYRALGGGW TAPTDAAAAP VAVSSNSPR
|
| |