Gene Mpe_A3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3556 
Symbol 
ID4786199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3763552 
End bp3764925 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content71% 
IMG OID640092137 
ProductDNA repair protein RadA 
Protein accessionYP_001022744 
Protein GI124268740 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGAA TGGCCAAGGA CAAGACGAAC TACACCTGCA GCGAATGCGG CGGCACGAGC 
CCCAAGTGGC TGGGCAAGTG TCCGGCCTGC GGGGCCTGGA ACACGCTGGA GGAGACTGTC
GCCGAGCCGG CCGCGGCCAC GCGGCATCGC TTCCAGTCGC TGGCGCGCAG CCAGCCCGTG
GCCACGCTCA GCGAGATCGA CGCGGCCGAC GTCGCGCGCA CGCCCACCGG CATCGAGGAA
CTCGATCGCG TGCTCGGCGG CGGCATCGTC GCCGGCGGCG TGGTGCTGAT CGGCGGCGAC
CCGGGCATCG GCAAGTCGAC GCTGCTGCTG CAGGCGGTCG ACGCGCTGTC GGCGCAGATG
AGGGTGCTGT ACGTCAGCGG CGAGGAGAGC GGCGCGCAGC TCGCGCTGCG CTCGCGCCGG
CTCGGCCTGG ACGGCAGCCG CGTGCGGGTG CTGGCCGAGA TCCACCTCGA GAAGATCCAG
GCCACGATCG ACGCCGAGCA GCCGGCCTTC TGCGTGATCG ACTCGATCCA GACCGTCTAT
TCGGACCAGC TCACGTCGGC CCCGGGCTCG GTGGCCCAGG TGCGCGAGTG CGCCGCCCAG
CTCACGCGCA CCGCCAAGTC CAGCGGCACC AGCATCGTTC TGGTCGGCCA CGTGACGAAG
GAGGGTGCGC TGGCCGGGCC GCGCGTGCTG GAGCACATCG TCGATACCGT GCTGTACTTC
GAGGGCGACA CGCACAGCAG CTTCCGTCTC GTGCGGGCCA TCAAGAACCG CTACGGCGCG
GTCAACGAGA TCGGTGTGTT CGCGATGACC GAGCGCGGCC TCAAGGGCGT GGCCAACCCG
AGCGCGATCT TCCTCTCGAC CCACGGCGAA CCGGTCCCGG GCTCCTGCGT GATGGTCACG
CTCGAAGGCA CCCGCCCGCT GCTGGTGGAG ATCCAGGCGC TGGTCGACAG CGGCGGGCCC
AGTCCGCGGC GCCTGTCGGT CGGCCTGGAG CGCGACCGAC TGGCGATGCT GCTCGCGGTG
CTGCACCGTC ATGCCGGCAT CGCCTGCATG GACCAGGACG TGTTCGTCAA CGCGGTCGGC
GGCGTGCGCA TCAGCGAGCC GGCGGCCGAC CTGGCGGTGA TGCTGGCGAT CCAGAGCTCG
CTGCGCGGGC GGCCGCTGCC GCGCGGCTTC ATCGCCTTCG GCGAGGTCGG TCTGGCCGGC
GAGGTGCGAC CTGCGCCGCG CGGCCAGGAG CGCCTGAAGG AGGCGGCCAA GCTGGGGTTC
AGTGTCGCGG TGCTGCCGAA GGCCAATGCA CCGAAGAAGC CGATCGAGGG CCTGCGGATC
CACGCCGTCG AGCGCGTCGA GCAGGCGATC GACGTGCTGC GGGAGCTGTC ATGA
 
Protein sequence
MRRMAKDKTN YTCSECGGTS PKWLGKCPAC GAWNTLEETV AEPAAATRHR FQSLARSQPV 
ATLSEIDAAD VARTPTGIEE LDRVLGGGIV AGGVVLIGGD PGIGKSTLLL QAVDALSAQM
RVLYVSGEES GAQLALRSRR LGLDGSRVRV LAEIHLEKIQ ATIDAEQPAF CVIDSIQTVY
SDQLTSAPGS VAQVRECAAQ LTRTAKSSGT SIVLVGHVTK EGALAGPRVL EHIVDTVLYF
EGDTHSSFRL VRAIKNRYGA VNEIGVFAMT ERGLKGVANP SAIFLSTHGE PVPGSCVMVT
LEGTRPLLVE IQALVDSGGP SPRRLSVGLE RDRLAMLLAV LHRHAGIACM DQDVFVNAVG
GVRISEPAAD LAVMLAIQSS LRGRPLPRGF IAFGEVGLAG EVRPAPRGQE RLKEAAKLGF
SVAVLPKANA PKKPIEGLRI HAVERVEQAI DVLRELS