Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3556 |
Symbol | |
ID | 4786199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3763552 |
End bp | 3764925 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640092137 |
Product | DNA repair protein RadA |
Protein accession | YP_001022744 |
Protein GI | 124268740 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGAA TGGCCAAGGA CAAGACGAAC TACACCTGCA GCGAATGCGG CGGCACGAGC CCCAAGTGGC TGGGCAAGTG TCCGGCCTGC GGGGCCTGGA ACACGCTGGA GGAGACTGTC GCCGAGCCGG CCGCGGCCAC GCGGCATCGC TTCCAGTCGC TGGCGCGCAG CCAGCCCGTG GCCACGCTCA GCGAGATCGA CGCGGCCGAC GTCGCGCGCA CGCCCACCGG CATCGAGGAA CTCGATCGCG TGCTCGGCGG CGGCATCGTC GCCGGCGGCG TGGTGCTGAT CGGCGGCGAC CCGGGCATCG GCAAGTCGAC GCTGCTGCTG CAGGCGGTCG ACGCGCTGTC GGCGCAGATG AGGGTGCTGT ACGTCAGCGG CGAGGAGAGC GGCGCGCAGC TCGCGCTGCG CTCGCGCCGG CTCGGCCTGG ACGGCAGCCG CGTGCGGGTG CTGGCCGAGA TCCACCTCGA GAAGATCCAG GCCACGATCG ACGCCGAGCA GCCGGCCTTC TGCGTGATCG ACTCGATCCA GACCGTCTAT TCGGACCAGC TCACGTCGGC CCCGGGCTCG GTGGCCCAGG TGCGCGAGTG CGCCGCCCAG CTCACGCGCA CCGCCAAGTC CAGCGGCACC AGCATCGTTC TGGTCGGCCA CGTGACGAAG GAGGGTGCGC TGGCCGGGCC GCGCGTGCTG GAGCACATCG TCGATACCGT GCTGTACTTC GAGGGCGACA CGCACAGCAG CTTCCGTCTC GTGCGGGCCA TCAAGAACCG CTACGGCGCG GTCAACGAGA TCGGTGTGTT CGCGATGACC GAGCGCGGCC TCAAGGGCGT GGCCAACCCG AGCGCGATCT TCCTCTCGAC CCACGGCGAA CCGGTCCCGG GCTCCTGCGT GATGGTCACG CTCGAAGGCA CCCGCCCGCT GCTGGTGGAG ATCCAGGCGC TGGTCGACAG CGGCGGGCCC AGTCCGCGGC GCCTGTCGGT CGGCCTGGAG CGCGACCGAC TGGCGATGCT GCTCGCGGTG CTGCACCGTC ATGCCGGCAT CGCCTGCATG GACCAGGACG TGTTCGTCAA CGCGGTCGGC GGCGTGCGCA TCAGCGAGCC GGCGGCCGAC CTGGCGGTGA TGCTGGCGAT CCAGAGCTCG CTGCGCGGGC GGCCGCTGCC GCGCGGCTTC ATCGCCTTCG GCGAGGTCGG TCTGGCCGGC GAGGTGCGAC CTGCGCCGCG CGGCCAGGAG CGCCTGAAGG AGGCGGCCAA GCTGGGGTTC AGTGTCGCGG TGCTGCCGAA GGCCAATGCA CCGAAGAAGC CGATCGAGGG CCTGCGGATC CACGCCGTCG AGCGCGTCGA GCAGGCGATC GACGTGCTGC GGGAGCTGTC ATGA
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Protein sequence | MRRMAKDKTN YTCSECGGTS PKWLGKCPAC GAWNTLEETV AEPAAATRHR FQSLARSQPV ATLSEIDAAD VARTPTGIEE LDRVLGGGIV AGGVVLIGGD PGIGKSTLLL QAVDALSAQM RVLYVSGEES GAQLALRSRR LGLDGSRVRV LAEIHLEKIQ ATIDAEQPAF CVIDSIQTVY SDQLTSAPGS VAQVRECAAQ LTRTAKSSGT SIVLVGHVTK EGALAGPRVL EHIVDTVLYF EGDTHSSFRL VRAIKNRYGA VNEIGVFAMT ERGLKGVANP SAIFLSTHGE PVPGSCVMVT LEGTRPLLVE IQALVDSGGP SPRRLSVGLE RDRLAMLLAV LHRHAGIACM DQDVFVNAVG GVRISEPAAD LAVMLAIQSS LRGRPLPRGF IAFGEVGLAG EVRPAPRGQE RLKEAAKLGF SVAVLPKANA PKKPIEGLRI HAVERVEQAI DVLRELS
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