Gene Mpe_A3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3456 
Symbol 
ID4786274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3666166 
End bp3666744 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content63% 
IMG OID640092036 
Producttranscription antitermination protein NusG 
Protein accessionYP_001022644 
Protein GI124268640 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.147926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.436073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG TCCAGACCCC AGCCACCACC GACGCCGTAC CCGCCAGCCC GCTGCGCTGG 
TACGTGGTGC ATGCCTACTC CGGCATGGAG AAGGCCGTCG AACGCAACCT GCGCGAACGC
ATCGACCGTG CCGGCATGCA GGCCAAGTTC GGCCGCATCC TCGTCCCGAC CGAGGAAGTG
GTCGAGATGA AGAACGGCAA GAAGGCCGTG ACCGAGCGCC GCTTCTTCCC CGGCTACGTG
CTGGTCGAGA TGCTGATGGA CGATGAGTCC TGGCATCTGG TGAAGCACAC CTCCAAAGTC
ACCGGCTTCG TCGGCGGCGC GAAGAACCGC CCGGCGCCGA TTTCCGAGGC CGAGGTGATG
AAGATCGTGC ACCAGATGCA GGAAGGCATC GAGAAGCCGC GCCCCAAGGT CGAGTGGGAA
GTGGGCGAAC TGGTGCGCGT CAAGGAAGGC CCGTTCACCG ACTTCAACGG TGCCATCGAA
GAAGTCAACT ACGACAAGTC GAAGGTGCGC GTCTCGGTGA CGATCTTCGG CCGCTCGACG
CCGGTGGAAC TGGATTTCCA CGAGGTCGAG AAGGTCTGA
 
Protein sequence
MSEVQTPATT DAVPASPLRW YVVHAYSGME KAVERNLRER IDRAGMQAKF GRILVPTEEV 
VEMKNGKKAV TERRFFPGYV LVEMLMDDES WHLVKHTSKV TGFVGGAKNR PAPISEAEVM
KIVHQMQEGI EKPRPKVEWE VGELVRVKEG PFTDFNGAIE EVNYDKSKVR VSVTIFGRST
PVELDFHEVE KV