Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3440 |
Symbol | rplB |
ID | 4786314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3646617 |
End bp | 3647441 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640092018 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001022628 |
Protein GI | 124268624 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00120945 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.134752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTCG TCAAAGTCAA GCCCACGTCC CCTGGCCGCC GTGCCGTGGT GAAGGTGGTG CATTCGCACC TGCACAAGGG CAAGCCCGAA GCGTCGCTGC TCGAGCCGCA GATCCAGAAT GCAGGCCGGA ACAACAACGG CCACATCACC ATCCGGCACA AGGGCGGTGG TCACAAGCAC CACTACCGCG TGGTCGATTT CAAGCGCAAC AAGGACGGCA TCCCGGCGAA GGTCGAGCGT ATCGAGTACG ACCCGAACCG AACCGCCCAC ATCGCGCTGG TGTGCTACGC CGATGGAGAG CGCCGTTACA TCATCGCTCC GCGCGGTCTG GAAGTCGGTG CCACCATCCT GAGCGGCTCG GAAGCGCCGA TCAAGGCCGG CAACACGCTG CCGATCCGCA ACATCCCGGT GGGCTCGACG ATGCACTGCG TCGAACTGCT GGCCGGCAAG GGCGCGCAGA TCGCGCGCTC GGCTGGCACT TCGGTGACGC TGCTGGCACG CGAAAGCACC TACGCCCAGG TTCGCCTGCG CTCGGGTGAG GTGCGTCGCA TCCACATCGA GTGCCGTGCC ACGATCGGCG AGGTGAGCAA CGAAGAGCAC AACCTGCGCC AGTACGGCAA GGCCGGTGCG ATCCGCTGGA AGGGCGTTCG CCCGACCGTT CGTGGCGTGG CCATGAACCC GGTGGACCAC CCGCACGGCG GCGGCGAAGG CCGCACCGGC GAGGGCCAGG TGCCGGTGTC GCCTTGGAAC ACGATGACCA AGGGCTACCG CACTCGCAGC AACAAGCGCA CGCAGACGTT CATCGTCTCG CGTCGCAAGA AGTAA
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Protein sequence | MAVVKVKPTS PGRRAVVKVV HSHLHKGKPE ASLLEPQIQN AGRNNNGHIT IRHKGGGHKH HYRVVDFKRN KDGIPAKVER IEYDPNRTAH IALVCYADGE RRYIIAPRGL EVGATILSGS EAPIKAGNTL PIRNIPVGST MHCVELLAGK GAQIARSAGT SVTLLAREST YAQVRLRSGE VRRIHIECRA TIGEVSNEEH NLRQYGKAGA IRWKGVRPTV RGVAMNPVDH PHGGGEGRTG EGQVPVSPWN TMTKGYRTRS NKRTQTFIVS RRKK
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