| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3417 |
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| Symbol | |
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| ID | 4786349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3634488 |
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| End bp | 3635489 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640091995 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001022605 |
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| Protein GI | 124268601 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.139577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA ATCTGCTGAA GCCCAAAGCC ATCAACGTCG AGCCGCTGAG CGCCGCCAAG
GGCGCCCACC GCGCCAAGGT CACGCTCGAG CCCTTCGAGC GCGGCTATGG TCACACGCTG
GGCAATGCCC TGCGCCGCGT GCTGCTGTCG TCGATGGTGG GCTACGCGCC GACCGAAGTC
ACGATCGCGG GCGTGCTGCA CGAGTACTCG GCGATCGACG GTGTTCAGGA AGACGTGGTC
CACGTCATGC TGAACCTCAA GGGTGTGGTG TTCCGCCTGC ACAACCGCGA TGAAGTCACG
CTGGTGCTGC GCAAGGAGGG TGAGGGTCCC GTCAAGGCCG GCGACATCCA GACCCCGCAC
GACGTGGAGA TCATCAATCC CGACCACGTG ATCACGCACC TGTCGCAGGG CGGCAAGCTC
GACATGCAGA TCAAGGTCGA GAAGGGCCGC GGCTATGTGC CGGGCACGAT GCGCCGCTTC
GGTGACGAGC CGACCAAGTC GATCGGTCGT ATCGTCCTCG ATGCGTCGTT CTCCCCGGTT
CGCCGCGTGA GCTACACGGT CGAAAGCGCG CGTGTCGAGC AGCGCACGGA CCTGGACAAG
CTGGTCATGG AGATCGAGAC CAACGGTGCG ATCACGCCGG AAGAGGCGAT CCGCGCCTCG
GCCAAGATCC TGGTCGAACA GCTGGCCGTG TTCGCGCAGC TCGAGGGCCA GATCAACGAC
ATCTTCGACG CCCAGCCCGC ACAGCGCAGC ACGCAGTTCG ATCCGATCCT GCTGCGTCCG
GTCGACGAGC TCGAGCTCAC CGTGCGCTCG GCCAACTGCC TGAAGGCCGA GAACATCTAT
TACATCGGCG ACCTCATCCA GCGCACCGAG ACCGAGCTGC TGAAGACGCC GAATCTCGGC
CGCAAGTCAC TCAACGAGAT CAAGGAAGTG CTGGCCTCGC GGGGGCTGAC CCTGGGCGGG
CGCCTTGAGA ACTGGCCGCC GCAAGGCCTG GACAAGCGCT AA
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| Protein sequence | MQTNLLKPKA INVEPLSAAK GAHRAKVTLE PFERGYGHTL GNALRRVLLS SMVGYAPTEV
TIAGVLHEYS AIDGVQEDVV HVMLNLKGVV FRLHNRDEVT LVLRKEGEGP VKAGDIQTPH
DVEIINPDHV ITHLSQGGKL DMQIKVEKGR GYVPGTMRRF GDEPTKSIGR IVLDASFSPV
RRVSYTVESA RVEQRTDLDK LVMEIETNGA ITPEEAIRAS AKILVEQLAV FAQLEGQIND
IFDAQPAQRS TQFDPILLRP VDELELTVRS ANCLKAENIY YIGDLIQRTE TELLKTPNLG
RKSLNEIKEV LASRGLTLGG RLENWPPQGL DKR
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