| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3403 |
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| Symbol | pilE |
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| ID | 4786333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3619592 |
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| End bp | 3620041 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640091979 |
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| Product | fimbrial biogenesis protein |
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| Protein accession | YP_001022591 |
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| Protein GI | 124268587 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00878868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCGACGAT TCATTTTCAA GCGGCAGTCG GGCTTCACGC TCATCGAGGT GATGATCGTC
GTTGCGATCA TCGGCATCCT GGCGGCCATC GCGTACCCGA GCTATCGCGA CTACATCATC
CGCGGGCAAT TGGTCGATGG CACCAACGGC CTCGCCTCGA TGCGCGCCGA GATGGAGCGC
CATTTTCAGG ACAATCGCAG CTACGCGACA GTCGGCGCAT TCGTCACACC CTGTGCCCGC
GCTGTCGCGA CGCGGACCTT CGGCAACTTC GTGGTGACTT GCTCTGCAGG TCCGACGGAC
ACCACCTACA CGCTGCTGGC GACTGGCAAC GGCCCTGTGG CGAACTTCGG CTTCACCGTC
ACCCAAGCCG ATGTCCGTGC CACGACGACA ACCGTCGCCG GCTGGATGAC AGGCGGCGCC
TGCTGGCTAG TCAGGAGAGG GCAGTGCTGA
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| Protein sequence | MRRFIFKRQS GFTLIEVMIV VAIIGILAAI AYPSYRDYII RGQLVDGTNG LASMRAEMER
HFQDNRSYAT VGAFVTPCAR AVATRTFGNF VVTCSAGPTD TTYTLLATGN GPVANFGFTV
TQADVRATTT TVAGWMTGGA CWLVRRGQC
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