Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3371 |
Symbol | |
ID | 4786358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3582393 |
End bp | 3583127 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640091947 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001022559 |
Protein GI | 124268555 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.302554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC GCCGCGTCGC CGGCGTCCCC CCCGACCCGC CGGACGCCTC GCCGGCGCTG CCGACCGATC GCGTCTACGA GGCGGTCTAT GCCGCCGTGA TCGACCAGCG CCTGCCGCCC GGCACGCGGC TGCGCGAGGA GGAGCTGGCG CAGGCCTTCG CGGTCTCGCG CACGGTGGTG CGCCAGGCGC TGCACCGGCT GGCGCAGGAC AGCATCATCG TGCTGCAGCC CAACCGTGGC GCCCGTGTGC CCGAGCCGAC GCGGCGTGAC GGCGAGCACG TGTTCGACGC CCGCCGCGTC GTCGAGTGCG AGGTGGTGCG TCGCCTCGCC GGCAAGCTGA GTGCGGCGCA ACTGGCCGAG CTGCGCGCGC TGGTGGCGGC CGAGGAGCGT GCGACGCGTT CGCAGAACAA GCAGGAGGCG ATCCGCCTGT CAGGCCGCTT CCACCTCGAG CTCGCGCGCC TGAGCGGCAA CCCGATCTTC CTGCGGTTGC TGGAGGAGCT GTTGCCGACC ACCTCGCTGC TGATGGCGCT GTACAAGGCG CCGGGCGAGC CGATGTGCGT GGCGCACAGC CACCGGCGCC TGCTGGCGGG CCTGGAGCGA GACGGGGCGG GCGCCGCGGC GACGGAGATG CGCCGCCATC TCAACGAGAT CGAGCGCTCG CTGTCGCAGC CGGCTTCCCC GGCGGTGCCC GCGCTGCGCG ACGTGTTCCG CGCCTACCGC GGCGGCGGCA CCTGA
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Protein sequence | MSQRRVAGVP PDPPDASPAL PTDRVYEAVY AAVIDQRLPP GTRLREEELA QAFAVSRTVV RQALHRLAQD SIIVLQPNRG ARVPEPTRRD GEHVFDARRV VECEVVRRLA GKLSAAQLAE LRALVAAEER ATRSQNKQEA IRLSGRFHLE LARLSGNPIF LRLLEELLPT TSLLMALYKA PGEPMCVAHS HRRLLAGLER DGAGAAATEM RRHLNEIERS LSQPASPAVP ALRDVFRAYR GGGT
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