| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3297 |
|---|
| Symbol | |
|---|
| ID | 4786456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3505168 |
|---|
| End bp | 3505872 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640091870 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022485 |
|---|
| Protein GI | 124268481 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.210866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.103895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTCG TGATCGGCAA CAAGAACTAC TCGTCGTGGT CGCTGCGGCC CTGGGTGCTG
ATGCGCCAGG CCGGCATCCC CTTCGAGGAG GTGATGATCC GCTTCGACAG CCTGGCGGCC
GATTCGAAGT TCCAGCAGGC GCTGGCCCGG CACACGCCGG CCGGCAAGGT GCCCGTGCTG
ATCGAAGACG ACGGTTTCGT GGTCTGGGAC ACGCTGGCGA TCGCCGAGTA CCTGGCCGAG
AAGTTCCCGC AGGCGAGCCT GTGGCCTGCC GATCCGAAGG CGCGTGCCCG CGCCCGCAGC
GTCTGCGCCG AAATGCATGC CGGCTTCGGC GCGCTGCGCA GCCACTGCCC GCTCAACATC
GAGGCCCGCT TGCCCGATGT GGGCGCCCGC CTGCTGCAGG AGCAGCCCGG GCTGCGGGCG
GACCTCCGGC GCATTGTCGA GCTATGGTCG GAGTTGCTGG GCGCGCACGG CGGCCCGTTG
CTGTTCGGCC GCTTCACCAT CGCCGACGCC TACTTCGCGC CGGTGTGCAG CCGCTTGAGG
ACCTATGGGC TGCCGGTGCC GCCCATCGCC GCGGCCTATA TCGACGCGGT GTTCGCGCTG
CCCGGCATGC AGGCCTGGGT GGCCGAGGCC CTGGCCGAGC AGGAGTTCCT GGACTTCGAG
GAGCCGTACC GCCAGTCCCG GACGGACGCC GCGGACGCTC CATGA
|
|---|
| Protein sequence | MQLVIGNKNY SSWSLRPWVL MRQAGIPFEE VMIRFDSLAA DSKFQQALAR HTPAGKVPVL
IEDDGFVVWD TLAIAEYLAE KFPQASLWPA DPKARARARS VCAEMHAGFG ALRSHCPLNI
EARLPDVGAR LLQEQPGLRA DLRRIVELWS ELLGAHGGPL LFGRFTIADA YFAPVCSRLR
TYGLPVPPIA AAYIDAVFAL PGMQAWVAEA LAEQEFLDFE EPYRQSRTDA ADAP
|
|---|
| |