| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3125 |
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| Symbol | |
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| ID | 4786638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3325734 |
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| End bp | 3327314 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640091696 |
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| Product | L-threonine ammonia-lyase |
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| Protein accession | YP_001022313 |
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| Protein GI | 124268309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00487268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.103539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCG CCGCGCCGCG CCCCGCCCCC CGCACTTCCG TCGCCAAACC CGCTCTCCGC
AAGGCTGGGG CCAAGCCCGA CTACCTGCAG CGCATCCTGA CCGCGCGGGT CTACGACGTG
GCCATCGAAT CGGCACTGCA GTTCGCACCG CAACTGTCGG AGCGGATGGG CAACCAGGTC
TGGCTCAAGC GCGAGGATGA ACAGGCGGTC TTCAGCTTCA AGCTGCGCGG CGCCTACAAC
AAGATGGCGC ACCTGAGCCC GCAGCAGCTG GGGCGCGGCG TGATCTGCGC TTCCGCCGGC
AACCACGCTC AGGGGGTTGC CCTGTCGGCC CGCAAGCTCC GCTGCCAAGC GACGGTCGTG
ATGCCGGTCA CCACGCCGCA ACTCAAGATC GAGGCTGTGC GGGCGCTCGG CGGCAAGGTC
GTGTTGCACG GCGAGAGCTA TTCCGATGCC TATGCCCATG CACTGAAACT CGAACGGGAG
CACGGGCAGA CCTTCGTGCA TCCTTTCGAC GATCCCGACG TGATCGCCGG TCAGGGCACC
ATCGCCATGG AGATCCTGCG CCAGCACCAG GGGCCGATCG ACGCCGTGTT CGTGGCAGTG
GGCGGTGGCG GGCTGATCTC GGGCATCGCT GCATACATCA AGGCGGTCCG GCCGGAGATC
CAGGTGATCG GCGTCCAGAC CACCGATTCC GATGCGATGC TGCGTTCGGT GCGCGCTGGC
AAGCGCGTGA CGCTGCACGA CGTGGGGCTG TTCTCCGACG GCACCGCCGT CAAGCTGGTG
GGCGAAGAGA CCTTTCGCCT GACGAAGCAG TGGGTCGACG ATTTCGAAGT GGTCGACACC
GACGCGGTCT GCGCGGCGAT CAAGGATGTG TTCCAGGACA CCCGCTCGAT CCTGGAGCCG
GCCGGCGCGC TGGGCGTGGC GGCCATCAAA CAGTACACGG CACGCACCGG CTGCAAGGGC
AAGACCTTCG TGGCGATCAC CTGCGGCGCC AACATGAACT TCGACCGATT GCGCTTCGTT
GCCGAGCGGG CCGAGGTGGG CGAGGAGCGC GAGGCGCTGT TCGCCGTCAC TATCCCGGAG
GAACGGGGTT CCTTCAAGCG CTTCTGCGAG TTGCTCGGCC CGCGCAGCGT CACGGAGTTC
AACTACCGCA TCTCGGACGC GCAGACCGCG CAGGTGTTCG TGGGCCTGTC CACGCGGGAA
CACGGCGAAT CGGCTCGCAT TGCCGAGCGG TTCGAGAAGC AGGGCTTCGC GACGGTCGAC
CTGACACACG ACGAACTGGC CAAGACCCAT ATCCGCCACA TGGTCGGCGG CCGCTCCGAG
CTGGCCCGCG AGGAGCGACT GTTCCGGTTC GTCTTCCCGG AGCGTCCGGG AGCGCTGATG
CGCTTCCTGA CCCGCATGCA CCCCGACTGG AACATCAGCC TGTTCCATTA CCGGAATCAG
GGTGCCGATT ACGGTCGCAT CCTTGTCGGC CTGCAGATTC CCCGCGGCGC GCAGCGCGCA
CTGCGAGAGT TCCTGTCCAC ACTGGATTAC CCCTGCGTCG AGGAGACCGA CAACCCGGTC
TACCAGCTCT TCCTGCGCTG A
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| Protein sequence | MARAAPRPAP RTSVAKPALR KAGAKPDYLQ RILTARVYDV AIESALQFAP QLSERMGNQV
WLKREDEQAV FSFKLRGAYN KMAHLSPQQL GRGVICASAG NHAQGVALSA RKLRCQATVV
MPVTTPQLKI EAVRALGGKV VLHGESYSDA YAHALKLERE HGQTFVHPFD DPDVIAGQGT
IAMEILRQHQ GPIDAVFVAV GGGGLISGIA AYIKAVRPEI QVIGVQTTDS DAMLRSVRAG
KRVTLHDVGL FSDGTAVKLV GEETFRLTKQ WVDDFEVVDT DAVCAAIKDV FQDTRSILEP
AGALGVAAIK QYTARTGCKG KTFVAITCGA NMNFDRLRFV AERAEVGEER EALFAVTIPE
ERGSFKRFCE LLGPRSVTEF NYRISDAQTA QVFVGLSTRE HGESARIAER FEKQGFATVD
LTHDELAKTH IRHMVGGRSE LAREERLFRF VFPERPGALM RFLTRMHPDW NISLFHYRNQ
GADYGRILVG LQIPRGAQRA LREFLSTLDY PCVEETDNPV YQLFLR
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