| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2967 |
|---|
| Symbol | |
|---|
| ID | 4783571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3148805 |
|---|
| End bp | 3150052 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640091538 |
|---|
| Product | multidrug resistance protein |
|---|
| Protein accession | YP_001022155 |
|---|
| Protein GI | 124268151 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTCC CGCGAGTTTC GATGCGCCAC GGGGCGCAGA TGGCCGTCCT GTCCCTGGCG
GCCCTGCTGG TGGCCTGCAG CCGCGGCGGC GCGGCCAACG CGCCGGCTGC CCCGCCGCCG
GCCGAGGTGG GTGTGCTGAC CATCAAGCCG CGCACCGTGT CGCTGCAGAA CGAGTTGCCC
GGCCGTGTCT CCGCGCTGCT GGTGGCCGAG GTCCGGCCGC AGGTCGGCGG CATCGTGCTG
ACCCGTGACT TCCGCGAAGG CAGCGATGTC CGCAAGGGCC AGACGCTGTA CCAGATCGAT
CCCGCGCCCT TCCGCGCGGC CTTCGGCAGC GCCCAGGCCA CGCTCGCCCG GGCCCAGGCC
AACGTGGTGG CGGCGCAAGC CAAGTCCGAC CGCTACAAGG AGCTGGTGCA GATCGACGCG
GTCAGCAAGC AGGCGGCCGA CGAAGCCATT GCGGCCGCCC TGCAGGCCGA GGCCGATGTC
GCCGCCGCCA AGGCTGCCCT CGAGACCGCC CGCATCAACC TCGCCTACAC GCGCATCACT
GCGCCGATCT CCGGCCGCAT CGGCAAGTCC AGCGTGACCC CGGGCGCGCT GGTGACCGCC
AACCAGGCGC AGGCGCTGGC GACGGTGCAG CAGCTCGACT CGATCTACGT CGACGTGACG
CAGTCCAGCG CCGAGTTGCT GAGACTGCGC CGCGAACTGG CCGCCGGACG CCTGAAGACC
GACGCGGCCA ACCAGGCCTC GGTGAAACTC AAGCTGGACG ACGGCACGCT GTATCCGGTG
AGCGGCAAGC TGCAGTTCTC CGATGTGACG GTCGATGAGC AGACCAACTC GGTGACGCTG
CGCGCGACCT TTCCCAATCC CAAGCAACTG CTGCTGCCGG GGCTGTACGT GCGGGCGGTG
CTGGAGGAAG GCGTGCGCGA GAACGCGATC CTGGTGCCGC AGCAGGCCGT GGCGCGCGAC
AACCGCGGCA ACGCGATCGC GATGGTGGTC GGGGCCGACG GCAAGGTCGC GCAGCGCGCG
GTGCAGGTGC CGCGCTCGGT CGGCAACGAA TGGCTGGTCG ATGCGGGTCT GAAGGCCGGT
GACCAGGTGG TGTTCGAGGG GCTGCAGAAG GCCCGCCCCG GCGCGCAGGT GAAGGCGGTG
GAGCGGGTGC CGGGCGCTGG CGCCTCGGCG CCGGCTCCCG CGGCTTCGGC GCCCGGCGCC
GCGGCGTCCG CTGCGACGCC GGCCCCTGCG GCGGCCAGCG GCACCTGA
|
|---|
| Protein sequence | MVFPRVSMRH GAQMAVLSLA ALLVACSRGG AANAPAAPPP AEVGVLTIKP RTVSLQNELP
GRVSALLVAE VRPQVGGIVL TRDFREGSDV RKGQTLYQID PAPFRAAFGS AQATLARAQA
NVVAAQAKSD RYKELVQIDA VSKQAADEAI AAALQAEADV AAAKAALETA RINLAYTRIT
APISGRIGKS SVTPGALVTA NQAQALATVQ QLDSIYVDVT QSSAELLRLR RELAAGRLKT
DAANQASVKL KLDDGTLYPV SGKLQFSDVT VDEQTNSVTL RATFPNPKQL LLPGLYVRAV
LEEGVRENAI LVPQQAVARD NRGNAIAMVV GADGKVAQRA VQVPRSVGNE WLVDAGLKAG
DQVVFEGLQK ARPGAQVKAV ERVPGAGASA PAPAASAPGA AASAATPAPA AASGT
|
|---|
| |