| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2796 |
|---|
| Symbol | psd |
|---|
| ID | 4785046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2977738 |
|---|
| End bp | 2978589 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640091367 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_001021985 |
|---|
| Protein GI | 124267981 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAAC GACTTCCCGT GCTGCTGCAG TACCTGGTGC CCCAGCGGGC GCTGACGGTG
TTTGCCGGCT TCGTGGCCTC GGGGCGCTGG GGCGGCATCA CGACCGCCAT CATCCGTCGC
TTCGTCCGCA AGTACCGGGT CGACATGAGC GAGGCGGCCG AGCCCGACAT CGCCCGCTAC
ACCCGCTTCA ACGACTTCTT CACCCGGGCG CTGCGCCCGG GCGCCCGCCC GCTGGCGTCG
GCCGAACTGG TGTGTCCGGT CGACGGCGCG ATCAGCCAGT TCGGCGCGAT CGAGCGCGAC
CAGATCTTCC AGGCCAAGGG GCACCACTAT TCGACCCGCG CGCTGGTCGG TGGCGACGCG
GAGCTGGCGG CGCGCTTCCA GGACGGGCAG TTCGCCACGC TCTACCTCAG TCCGCGTGAC
TACCACCGCA TCCACATGCC CTGCGACGGC CGGCTGCTGC GCATGATCCA CGTGCCGGGG
GACCTGTTTT CGGTCAACCC GGTCACCGCG CGCGGTGTCC CGGGGCTGTT CGCGCGCAAC
GAGCGGGTGG TCTGCGAGTT CGACGGACCG CTGGGGCCCT TCGTGCTGGT GCTCGTGGGG
GCGACCATCG TCGGCAGCAT GGCCACGGTC TGGCACGGCC AGGTGAATCC CCCGCGCAGC
GGCCGGCTGC GCGAGTGGCG CTATGCCGAC CGCGAACTGC GGCTGCGGCA GGGTGAGGAG
ATGGGGCGGT TCCTGCTGGG GTCGACCGTC GTGGCACTGT TTCCGCAGGG TTCGGTCCGC
TTCGATCCGG GCTGGGAGCC CGGACGGGCA GTGCGCCTGG GCGAGGCGAT GGCGTTCGCT
CCGCTTCTGT AG
|
|---|
| Protein sequence | MSERLPVLLQ YLVPQRALTV FAGFVASGRW GGITTAIIRR FVRKYRVDMS EAAEPDIARY
TRFNDFFTRA LRPGARPLAS AELVCPVDGA ISQFGAIERD QIFQAKGHHY STRALVGGDA
ELAARFQDGQ FATLYLSPRD YHRIHMPCDG RLLRMIHVPG DLFSVNPVTA RGVPGLFARN
ERVVCEFDGP LGPFVLVLVG ATIVGSMATV WHGQVNPPRS GRLREWRYAD RELRLRQGEE
MGRFLLGSTV VALFPQGSVR FDPGWEPGRA VRLGEAMAFA PLL
|
|---|
| |