| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2781 |
|---|
| Symbol | cbbR |
|---|
| ID | 4785031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2962383 |
|---|
| End bp | 2963372 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640091352 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001021970 |
|---|
| Protein GI | 124267966 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAGA ACGCGACGCT GCGCCAGCTT TCGGCATTCC ATGCCGTCGC TCGGCTGGGC
AGCGTGTCGC GTGCCGCGAG CGAGCTCTAC CTGACCCAGC CCGCGGTCTC GATCCAGCTC
AAGCTGCTGG AGGAATCGGC CGGGACGCCG CTGCTGCAGC GCGAGGGCCG CGGTGTGCGA
CTCACGCCGG CGGGCGACCT GATGGCGTCC TATGCGGGCC GCATCCTCGA CCTGTGGCGC
GACGTCGGCG ACGAGATGGC CACGCTGCGA GGCGTGTTCT CGGGCACGCT GCGCGTCGGT
GCCGTGACGA CCGCTGAATA CCTGCTGCCG CCGTTGCTGG TGAGCTTCGC GAACGAGCAT
CCCAACGTGA AGGTCAAGCT GCGCGTCGGG AACCGCGACG AGATCGTGCG GATGCTCGCG
GCCCAGGAGG TCGACCTGGT GATCATGGGC CGCCCGCCCG GAGAGCTGAA GACCGTGGCG
ACAGCCTTTG CCAAGCACCC GATGGCCTTC ATCGCGTCGC CGCGCCACCC GTTGATGGCG
CAGCGCAGGC TGACGCTGGC CGATCTGGAG GGTGCCAGCC TGCTGGCACG TGAGCGCGGC
TCTGGCACCC GCACGACGCT GGAGCGCCTG TTCAAGGACG AGGCCATCAC CTTGCGCATC
GGCTCCGAGC TGTCGAGCAA CGAGGCCATC AAGCAGATGT GCGTGGCGGG CTTCGGCGTG
GCCTTCCTGT CCTTGCACAC CTGCCGGCTC GAGCTCGACG CCGATCTGCT GCAACTGCTG
CCGCTGGACA GCAACCCTGT CGAGCGTGAG TGGTTCGTGT TGCACCTGGC GTCGCGACAG
CTGCCGCAGG TGGCGGTGGC ATTCGAGCAG TTCCTGACCG CGCAGGGGCA GCGTCTCATC
CATGCCCAGT TGCAGACTTC GGTTGAGCCC AAGCCTCGGG TGGTGGGTCG GCGACCACGC
CCGGACCGAG CGGCGCTGGT AACGGACTGA
|
|---|
| Protein sequence | MLKNATLRQL SAFHAVARLG SVSRAASELY LTQPAVSIQL KLLEESAGTP LLQREGRGVR
LTPAGDLMAS YAGRILDLWR DVGDEMATLR GVFSGTLRVG AVTTAEYLLP PLLVSFANEH
PNVKVKLRVG NRDEIVRMLA AQEVDLVIMG RPPGELKTVA TAFAKHPMAF IASPRHPLMA
QRRLTLADLE GASLLARERG SGTRTTLERL FKDEAITLRI GSELSSNEAI KQMCVAGFGV
AFLSLHTCRL ELDADLLQLL PLDSNPVERE WFVLHLASRQ LPQVAVAFEQ FLTAQGQRLI
HAQLQTSVEP KPRVVGRRPR PDRAALVTD
|
|---|
| |