| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2510 |
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| Symbol | |
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| ID | 4784906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2677440 |
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| End bp | 2679920 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091080 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001021700 |
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| Protein GI | 124267696 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.825062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC CCCCGCCCGT GTGGGAGCCG CTGATCGGCA GCCTGCTCGA GGCCGTCTGC
CTGGTCGAGC CGTTGACGCT GCACGTCGTC GCGGCCAACG AGGCCGCGGC CGCCCTGTTC
GGCCAGCCGG TGTCGGCGCT GGTCGGTCGG CCGGTGATCG AGCTGTCGGC CACGCCCGAG
GACGAGTGTT TCTGGGAGGA CATGGCGGCC GGTGTCGGCA CCGCCGAGGG CCCGCAGATC
CACTCGGACA GCTTCGTGCG CCATGCCGAC GGCCGCATGA TCCCCGTCGA GCGGCGCGTC
AACCGCATCT GGATGCGTCC CGGTCAGGCG ATCTTCGTGC TCGGCCTGCG CGACCAGAGC
GCCCAGCGCC AGGCCGAGGA CGAGCTCGAG AAGCTGGTGG CCGAGCTGCG CGCCACGCTC
GAGTCGACCG CCGAGGGCAT CCTCGTCACC GACCTGCACG GCGCGATCCG CGGCTGCAAC
CAGCTGTTCG CGCAGCTGTG GGACATGCCG GTCGAGCTGC TGACACAACG CGACGACAGC
CAGATCCTCG AATGGATGCG CGGCCATGTC GTCGACGAGC AGCGTTTCGT CGAGCGTATG
GGCGAACTGG ACCGTGATCC GCTGCTGCGG GCCAGCGACG TGCTGCGCCT GCGCTCCGGA
CGCGTGCTCG AACGCGTGGT GCTGCCGCAG TACGGCCGCG GCCAGCCGAT CGGCCGGGTC
TGCTCGTTCC GTGACATCAC CGAGCAACTG GCCAGCGCCG CGCGCCTGCA ACTTGCCGCG
CAGGTGTTCG AGTCCAGCCT CGACGCGATC TTCGTGACCG ACGGCGAGCA CCGCATCGCC
GCCGTCAATG CCAGCTGCGA GCGCATCACC GGCCTTGGCC GCGAGCAACT GGTCGGCCTG
CGTACCGAGG CCCTGCTGCA CCCGCCCGGC GCCGACGACG CCGACACCGC CTGGTTCGAG
CTGGTGCGCG AGCAGCTTGC GCACCGCGGC GTATGGGAGG GCGAGCTGTG GCATCGCCGT
GCCGACGGCA GCACGCTGCC GGGGCAGGTG TCGCTGGTGC GACTGGCCGC GGAAGGCACG
GATCCGGGCG AGACCGGCGT GCGCCACGTC GGCTTCTTCA AGGACCTGAC CGAAACCGTG
GCGGCGCAGA AGCGCATCGA GGAGCTGGCC TTCACCGATG CGCTGACGGG CCTGCCCAAC
CGCGTGATGC TGGCCGAGCG CCTGGACTTC GCGCTGGCGA TGTCGCACCG CCACCAGACG
CCGTTCGCGC TGCTGTTCCT CGACCTGGAC CGCTTCAAGC AGATCAACGA CTCGCTCGGT
CACGTGTTCG GCGACCGCGT GCTCGTCGAG GTGGCCGAAC GGCTGAAGAC CTGCCTGCGT
CAGATCGACA CCGTGGCGCG GCTGGGTGGC GACGAGTTCG TGATGCTGCT GAACCAGACC
GACGCGCGCG GCGCCGAGGC CATTGCTCGG CGCGTGCTCG AGGTGCTGGG GCAACCCTTC
ACGCTGGAGG GCATGAGCTT CAGCGTCACC GCGAGCATCG GCATCGCGAT GTACCCGAAC
GACGGCGAGT CGATGGACGA TCTGATCAAG AACGCCGACG CCGCGATGTA CCGCGTGAAG
GAGCGAGGCC GTGCCGGCTT CCGCTTCTAC CAGCCTCAGA TGAACGTCGA CCTGCTGGCG
CGCATGAAGC TGGACCACTC CATGCGCCTG GCGCTGGAGC GCGGCGACTT CCGGTTGCAC
TACCAGCCGC AGATCGACAT CGCCTCGAAC GCGGTGGTGG GTGCCGAGGC GCTGCTGCGC
TGGCGCGACC CGGGCCTCGG CGACGTGTCG CCGGGCGAGT TCATCCCGGT GGCAGAGGAG
AGCGGCTTCA TCGTCGCGCT GGGCGAATGG GTGCTGCGCG AGGCGGTGCG GCAGGCCGCG
CTGTGGCGTG CGCAGGGCCG CTCGATGGTG GTGTCGGTGA ACGTGTCGGC GCTGCAGTTC
CAGCAGGCCG ACTTCGTCGA TCGCGTGGCG ACGGCGCTCG CCGAGGCCAA ACTGCCGGCG
ACCTGGCTCG AGCTCGAACT GACCGAGTCG ATCCTGATCC GCGATGCCGA CGAGGCCCTG
CAGCGCCTGC GCGCGCTCGA CCGGCTCGGC GTGCAGCTCG CGATCGACGA CTTTGGCACC
GGCTACTCGA GTCTCGGCTA CCTGAAGCGC TTCCCGATCA GGAAGCTCAA GATCGATCGC
AGCTTCATCA AGGGCCTGCC GGGCGACGAG AGCGATGCCG GCATCGCGCA GGCGGTGATC
CAGGTGGCGC GCGCACTGCG GCTGCGCGTG ATCGCTGAGG GCGTGGAGAC CATGGCGCAG
CGCGATTTCC TGCAGCGCGC CGGCTGCGAC GAGATCCAGG GCTTCCTGTT CGCGCCGGCC
CTCCCGGTCG CGGAGTTCGA GGCACGGACT GCGACGATGC TCGATCTGCC CAGCGGGGCG
AAGGCGCGCG CGCTGGCTTG A
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| Protein sequence | MTTPPPVWEP LIGSLLEAVC LVEPLTLHVV AANEAAAALF GQPVSALVGR PVIELSATPE
DECFWEDMAA GVGTAEGPQI HSDSFVRHAD GRMIPVERRV NRIWMRPGQA IFVLGLRDQS
AQRQAEDELE KLVAELRATL ESTAEGILVT DLHGAIRGCN QLFAQLWDMP VELLTQRDDS
QILEWMRGHV VDEQRFVERM GELDRDPLLR ASDVLRLRSG RVLERVVLPQ YGRGQPIGRV
CSFRDITEQL ASAARLQLAA QVFESSLDAI FVTDGEHRIA AVNASCERIT GLGREQLVGL
RTEALLHPPG ADDADTAWFE LVREQLAHRG VWEGELWHRR ADGSTLPGQV SLVRLAAEGT
DPGETGVRHV GFFKDLTETV AAQKRIEELA FTDALTGLPN RVMLAERLDF ALAMSHRHQT
PFALLFLDLD RFKQINDSLG HVFGDRVLVE VAERLKTCLR QIDTVARLGG DEFVMLLNQT
DARGAEAIAR RVLEVLGQPF TLEGMSFSVT ASIGIAMYPN DGESMDDLIK NADAAMYRVK
ERGRAGFRFY QPQMNVDLLA RMKLDHSMRL ALERGDFRLH YQPQIDIASN AVVGAEALLR
WRDPGLGDVS PGEFIPVAEE SGFIVALGEW VLREAVRQAA LWRAQGRSMV VSVNVSALQF
QQADFVDRVA TALAEAKLPA TWLELELTES ILIRDADEAL QRLRALDRLG VQLAIDDFGT
GYSSLGYLKR FPIRKLKIDR SFIKGLPGDE SDAGIAQAVI QVARALRLRV IAEGVETMAQ
RDFLQRAGCD EIQGFLFAPA LPVAEFEART ATMLDLPSGA KARALA
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