| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2481 |
|---|
| Symbol | |
|---|
| ID | 4785678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2641564 |
|---|
| End bp | 2642145 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640091051 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | YP_001021671 |
|---|
| Protein GI | 124267667 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.152277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.398942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACA CCCTGCCGCC GCTGCCGTAT GCGATGGACG CCCTCGCGCC GCACCTCTCG
AAGGAGACCT TCGAGTTCCA CTACGGCAAG CACCACCAAG CCTACGTGAC CAATCTCAAC
AACCTGATCA AGGGCACCGA GTTCGAGTCG CTGAGCCTGG AAGACATCGT CAAGAAGTCC
AGCGGTGGCG TGTTCAACAA CGCAGCCCAG ATCTGGAACC ACACCTTCTT CTGGAACAGC
ATGAAGCCGC AGGGCGGCGG TGCGCCGAGC GGCGCGCTGG CGGCCGCCAT CGACGCCAAG
TGGGGCAGCC TGGCCGCCTT CAAGGAAGCC TTCGCGAAGA GTGCCGTCGG CAACTTCGGC
TCCGGTTGGA CCTGGCTCGT GAAGAAGGCG GACGGCTCGG TGGACATCGT CAACACCGGC
AACGCCGCCA CCCCGCTGAC CACCGCCGAC AAGGCGCTGC TGACGGTCGA CGTGTGGGAG
CATGCCTATT ACATCGACTT CCGCAATGCG CGCCCGAAGT TCGTCGAGAC CTTCCTCAAT
TCGCTCGTGA ACTGGGACTT CGCAGCGAAG AACTTCGCCT GA
|
|---|
| Protein sequence | MEHTLPPLPY AMDALAPHLS KETFEFHYGK HHQAYVTNLN NLIKGTEFES LSLEDIVKKS
SGGVFNNAAQ IWNHTFFWNS MKPQGGGAPS GALAAAIDAK WGSLAAFKEA FAKSAVGNFG
SGWTWLVKKA DGSVDIVNTG NAATPLTTAD KALLTVDVWE HAYYIDFRNA RPKFVETFLN
SLVNWDFAAK NFA
|
|---|
| |