| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2342 |
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| Symbol | |
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| ID | 4784562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2510537 |
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| End bp | 2512552 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640090911 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001021533 |
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| Protein GI | 124267529 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGT TCCTGTGCGA GAAGCCGTCC CAGGGCAAGG ACATCGCCCG TGTGCTGGGT
GCCGGTCAAC GCGGCAACGG CTGCTACAGC GGCGCGGGTG TCGTCGTGAC CTGGTGCATC
GGTCATTTGG TGGAGGCGGT TCCGCCCGAA GGCTACGGCG AGCAATACAA GCGCTGGGCC
ATCGAACAAC TGCCTATTCT TCCTGAGCGT TGGCGTGTCG AGCCCAAGGC GGCGACCGCA
GCGCAATTCA AGGTCGTGCA GCAGCTCGTC GCCAAGGCGG GCGAGCTGGT GATCGCGACT
GACGCCGACC GCGAGGGCGA GATGATCGCC CGCGAGATCA TCGACCTATG CGGCTACCGC
GGGCCGATTC AGCGCCTGTG GCTGTCGGCG CTCAACGATG CGTCGATCCG CAAAGCGCTG
GGTGCGCTCA AGCCGTCCGA CGAGACGCTG CCGCTGTATT TCTCCGCACT CGCCCGATCG
CGCGCCGACT GGCTGATTGG GATGAACCTG AGCCGCTTGT TCACACTGCT GGGGCGCCAG
GCCGGCTATA CCGGCGTGCT GTCGGTGGGG CGCGTGCAGA CGCCGACGCT GAAGTTGGTC
GTGGACCGCG ATCGCGAGAT CGCGCGATTC GTCTGCGTAC CGTTCTGGGC CATCGAGGTT
GCGCTTTCGC ATGCAGGCCA GTCCTTCGTC GCAAGCTGGA CGCCGCCGCA AGGCAGCGCC
GACGACGCCG ACCGCTGCTT GCAGCAGCCG GTGGCGCAGC AGGCAGCGGA ATTCCTGCGC
GCGGCCGGCA CCGCCCAGGT GCTGTCGGTG GAGACCGAGC GCGTGCGCGA AGGGCCGCCG
CTGCCGTTCG ACCTGGGCAC GCTGCAGGAG GTGTGCTCCA AGCAGTTGGG CCTCGACGTG
CAGGAGACGC TGGACATTGC CCAGGCGCTG TACGAGACGC ACAAGGCGAC AACGTATCCG
CGCTCGGATT CGGGCTACCT GCCCGAGAGC ATGCTGGCCG AGGTGCCGAC GGTACTCAAC
AGCCTGGTCA AGACCGACCC CAGCTTGCGG CCGCTGATCG AGCGCCTGGA TCGCCAACAG
CGTTCGCGTG CATGGAACGA CGGCAAGGTG TCGGCTCACC ACGGCATCAT CCCGACGCTG
GAGCCCGCCA ACCTGTCGGC CATGAACGAG AAGGAACTGG CCGTCTACCG GCTGATCCGC
GCTCATTACC TCGCGCAGTT CCTCCCACAC CATGAGTTCG ACCGGACGGT GGCGCAGTTC
TCGTGCGGCA GTCAGTCGCT GGCGGCCGTG GGCAAGCAGA TCGCCGTCAT CGGCTGGCGT
GAGGTGCTGG CGACGCCGGG GCCGGACGAT GCCGATGGCG AGGATGCGCA GCGCAGCCAG
GTGCTGCCCG CCCTGCATGC GGGCCTGTCC TGCCCGGTCG GAAAGGTGGA TCTCAAGGCG
CTGAAGACGC TGCCGCCCAA ACCCTACACG CAGGGCGAGC TGATCAAGGC CATGAAGACC
GTCGCCAAGC TCGTGACCGA CCCGCGCCTG AAGCAGAAGC TGCGAGATAC CACCGGCATC
GGCACCGAGG CGACACGCGC CAACATCATC AACGGTCTGA TCGGTCGCGG CTACCTGGTC
AAGAAAGGCC GCGCCGTCCG CGCTTCCGAC GCGGCATTCA CGCTCATCGA CGCGGTGCCC
TCAGCCATCG CCGACCCCGG CACCACGGCG GTGTGGGAGC AGGCGCTCGA CATGATCGAG
GCCGGCCAGA TGACGCTGGA CACCTTCATC GAGAAGCAGT CCGTGTGGGT CGGCCAGCTC
GTGCAGCAGT ACCGCGGCGC AACGCTCTCG CTCAAGCTGC CGCCGGCGCC GGCCTGCCCG
CAGTGCGCCG CACCGATGCA GCAGCGCACG GGCAAGAGCG GCGCGTTCTG GTCCTGCTCG
CGCTACCCGG ACTGCAAGGG CACGTTGCCG ATCGAGTCCC CGACGGGCCG GCGCAGCGCA
CCGCGCAAGC GGCGCGCTGC CTCCAAGGCG TCCTGA
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| Protein sequence | MRVFLCEKPS QGKDIARVLG AGQRGNGCYS GAGVVVTWCI GHLVEAVPPE GYGEQYKRWA
IEQLPILPER WRVEPKAATA AQFKVVQQLV AKAGELVIAT DADREGEMIA REIIDLCGYR
GPIQRLWLSA LNDASIRKAL GALKPSDETL PLYFSALARS RADWLIGMNL SRLFTLLGRQ
AGYTGVLSVG RVQTPTLKLV VDRDREIARF VCVPFWAIEV ALSHAGQSFV ASWTPPQGSA
DDADRCLQQP VAQQAAEFLR AAGTAQVLSV ETERVREGPP LPFDLGTLQE VCSKQLGLDV
QETLDIAQAL YETHKATTYP RSDSGYLPES MLAEVPTVLN SLVKTDPSLR PLIERLDRQQ
RSRAWNDGKV SAHHGIIPTL EPANLSAMNE KELAVYRLIR AHYLAQFLPH HEFDRTVAQF
SCGSQSLAAV GKQIAVIGWR EVLATPGPDD ADGEDAQRSQ VLPALHAGLS CPVGKVDLKA
LKTLPPKPYT QGELIKAMKT VAKLVTDPRL KQKLRDTTGI GTEATRANII NGLIGRGYLV
KKGRAVRASD AAFTLIDAVP SAIADPGTTA VWEQALDMIE AGQMTLDTFI EKQSVWVGQL
VQQYRGATLS LKLPPAPACP QCAAPMQQRT GKSGAFWSCS RYPDCKGTLP IESPTGRRSA
PRKRRAASKA S
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