| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2303 |
|---|
| Symbol | |
|---|
| ID | 4785788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2467465 |
|---|
| End bp | 2468523 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640090871 |
|---|
| Product | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_001021494 |
|---|
| Protein GI | 124267490 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.260637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.945822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGA CACCGCCGGC CGTCGCGCCC CGCGCTGACG CAGCGCTCAC CGCTCGCCTG
CGGCAGCGCA TCGACCACCT GACCAAGCCG CTCGGCGCGC TGGGCCAGCT GGAAGCGCTG
ATGCTGCAGG CCGGCCTGCT GCAGGGCCGC GTGGACCCTC GGCTGGACGC ACCGCAGGTG
CTGGTGTTCG CGGCCGACCA CGGCCTCGCG GCGCGCGGCG TGTCGGCCTA TCCGAGCGAC
GTGACCGCGC AGATGGTCGA GAACTTCCTT GCCGGCGGCG CGGCGATCAG TGTGCTGGCG
CGCCTGCACG GCCTGCCGCT GACGGTGGTG GACGCCGGCG TGCGCGGCGC GCGGGCGGTG
CGGCCGGGTC TGATCGTGCG GCCGGTCGCG CCGGGCGGAA CCGCCGATGC GTCGCTGGGC
CCGGCGATGA GCCGGGCGCA GTGCGTGCAG GCGCTGGAAC TCGGCCGCGA GGTCGTCGGC
TCGGTGCCGG GCAACGCGCT GGTGCTGGGC GAGATGGGCA TCGGCAACAC CTCGGCCGCG
GCGCTGCTGA CGGCACACTT CACCGGCGCG CCGCTGGCCG CCTGCGTGGG CCGCGGCACC
GGACTCGACG ATGCGGGGTT GGCCCGCAAG CTCGAGGTTC TGGCGCAGGT GGCGCAGCGC
CATGCGGGCG TCGCCACGCC GCTCGAGGCG CTGGCGGCCT TCGGCGGCTT CGAGATCGCC
GCGCTGGCCG GTGCGATGTT GCAGGCCGCG CACGAGCGGC GGCTGATCGT CGTCGACGGC
TTCATCGTCA CCGCCGCGCT GCTGGTCGCG CACGCGCTGC GGCCAGCGGT GCTGGAGGCC
TGCGTGTTCG CGCACTGCTC CGACGAGGCC GGCCACGCCC GCGCGCTGGC GCACCTGGGT
GCGCGTCCGC TGCTGGCGCT GGACCTGCGG CTCGGCGAAG GCTCGGGCGC GGCGCTGGCC
TGGCCGCTGG TGGTCGGCGC GGTGGCATTG CTCGACGGCA TGGCCTCGTT CGACAGTGCC
GGAATCAGCG GGCGCGATGC GAGCACCGCG ACCGCATGA
|
|---|
| Protein sequence | MDWTPPAVAP RADAALTARL RQRIDHLTKP LGALGQLEAL MLQAGLLQGR VDPRLDAPQV
LVFAADHGLA ARGVSAYPSD VTAQMVENFL AGGAAISVLA RLHGLPLTVV DAGVRGARAV
RPGLIVRPVA PGGTADASLG PAMSRAQCVQ ALELGREVVG SVPGNALVLG EMGIGNTSAA
ALLTAHFTGA PLAACVGRGT GLDDAGLARK LEVLAQVAQR HAGVATPLEA LAAFGGFEIA
ALAGAMLQAA HERRLIVVDG FIVTAALLVA HALRPAVLEA CVFAHCSDEA GHARALAHLG
ARPLLALDLR LGEGSGAALA WPLVVGAVAL LDGMASFDSA GISGRDASTA TA
|
|---|
| |