Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2171 |
Symbol | |
ID | 4784860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2328222 |
End bp | 2328998 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640090739 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001021362 |
Protein GI | 124267358 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.233669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACG CGCTGCCTCC CCCCCTGTCT GCGGAAGACA CGTCGCTCGA GGTGTCGGGG CCGGCCTTCA GTCCGCTGTA TCAGCAGATC AAGGCGCTGA TCACGCGCAG CCTGCAGGGC GGCGAGTGGC GCCCCGGCGA GGCTATTCCG AGCGAGATCG AACTTGCGGC ACGCTACAAG GTCAGCCAGG GGACGGTGCG CAAGGCGATC GATGAACTCG CCACCGAGAA CCTGGTTGTT CGCCGCCAGG GCAAGGGGAC CTTCGTCGCG ACCCACGCGG AGCAGCAGGT GCAGTACCGC TTCCTGCGTC TGGTTCCCGA TGCAGAGGGC AAGGTCGGCG CCGTGGAGCG CCGCTTCCTC GATTGTCGGC GCGTCCGGGC GCCGGCCGAG GTCGCGCGTG CGCTGGAGTT GAAGGCTGGC GAGACGGTGA TCCAGGTCAG GCGCCTGCTG TCGTTCGGCG GCCGCCCGGT GGTGCTGGAC GACATTTGGC TCAACGGCGC GCTGTTCAGG GGGCTCACGG CCGAACGGCT GGCCGATTCG CGCGGCGCGT TGTACGCCAC CTTCGAAGCG GAATTCGGTG TTCGGATGAT CCGTGCCGAA GAAAAGCTGA GGGCGGTGGC CGCGATGGCC GTCGAGGCCG AGTTGCTGCA GGTGGCGCTC GGCGCACCTC TGCTGAGCGT GGAGCGGCGC ACGCTGACCT ACGGGGACCG GCCGGTGGAA CTGCGCCGCG GGCTGTACGA CACGACGCTC CATCACTACA GGAACGAGTT GAGCTGA
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Protein sequence | MANALPPPLS AEDTSLEVSG PAFSPLYQQI KALITRSLQG GEWRPGEAIP SEIELAARYK VSQGTVRKAI DELATENLVV RRQGKGTFVA THAEQQVQYR FLRLVPDAEG KVGAVERRFL DCRRVRAPAE VARALELKAG ETVIQVRRLL SFGGRPVVLD DIWLNGALFR GLTAERLADS RGALYATFEA EFGVRMIRAE EKLRAVAAMA VEAELLQVAL GAPLLSVERR TLTYGDRPVE LRRGLYDTTL HHYRNELS
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