Gene Mpe_A2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2171 
Symbol 
ID4784860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2328222 
End bp2328998 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID640090739 
ProductGntR family transcriptional regulator 
Protein accessionYP_001021362 
Protein GI124267358 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.233669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG CGCTGCCTCC CCCCCTGTCT GCGGAAGACA CGTCGCTCGA GGTGTCGGGG 
CCGGCCTTCA GTCCGCTGTA TCAGCAGATC AAGGCGCTGA TCACGCGCAG CCTGCAGGGC
GGCGAGTGGC GCCCCGGCGA GGCTATTCCG AGCGAGATCG AACTTGCGGC ACGCTACAAG
GTCAGCCAGG GGACGGTGCG CAAGGCGATC GATGAACTCG CCACCGAGAA CCTGGTTGTT
CGCCGCCAGG GCAAGGGGAC CTTCGTCGCG ACCCACGCGG AGCAGCAGGT GCAGTACCGC
TTCCTGCGTC TGGTTCCCGA TGCAGAGGGC AAGGTCGGCG CCGTGGAGCG CCGCTTCCTC
GATTGTCGGC GCGTCCGGGC GCCGGCCGAG GTCGCGCGTG CGCTGGAGTT GAAGGCTGGC
GAGACGGTGA TCCAGGTCAG GCGCCTGCTG TCGTTCGGCG GCCGCCCGGT GGTGCTGGAC
GACATTTGGC TCAACGGCGC GCTGTTCAGG GGGCTCACGG CCGAACGGCT GGCCGATTCG
CGCGGCGCGT TGTACGCCAC CTTCGAAGCG GAATTCGGTG TTCGGATGAT CCGTGCCGAA
GAAAAGCTGA GGGCGGTGGC CGCGATGGCC GTCGAGGCCG AGTTGCTGCA GGTGGCGCTC
GGCGCACCTC TGCTGAGCGT GGAGCGGCGC ACGCTGACCT ACGGGGACCG GCCGGTGGAA
CTGCGCCGCG GGCTGTACGA CACGACGCTC CATCACTACA GGAACGAGTT GAGCTGA
 
Protein sequence
MANALPPPLS AEDTSLEVSG PAFSPLYQQI KALITRSLQG GEWRPGEAIP SEIELAARYK 
VSQGTVRKAI DELATENLVV RRQGKGTFVA THAEQQVQYR FLRLVPDAEG KVGAVERRFL
DCRRVRAPAE VARALELKAG ETVIQVRRLL SFGGRPVVLD DIWLNGALFR GLTAERLADS
RGALYATFEA EFGVRMIRAE EKLRAVAAMA VEAELLQVAL GAPLLSVERR TLTYGDRPVE
LRRGLYDTTL HHYRNELS