| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2071 |
|---|
| Symbol | |
|---|
| ID | 4784646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2216649 |
|---|
| End bp | 2217419 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640090639 |
|---|
| Product | exodeoxyribonuclease III |
|---|
| Protein accession | YP_001021262 |
|---|
| Protein GI | 124267258 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.663777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTTG CCACCTGGAA CGTCAACTCG CTCGCCGTGC GCCTGCCTCA GGTGCTGGAC
TGGTTGACCG CGAACCCGGT CGACGCGCTG GTGCTGCAGG AAACCAAGCT CACCGACGAC
AAGTTCCCGC GCGCCGAAAT CGAGGCCGCC GGTTACGCGG TGCAGTGGTT CGGGCAGAAG
ACCTACAACG GCGTGGCGCT GCTGTCGCGC GAGCCGGCGC ATGACGTGAC GAAGAACATC
TTCGGCTTCG CCGACGAGCA GGCCCGCGTG ATCGCCGGCA CGGTGGACGG CGTGCGCGTG
ATCGGCGCCT ACTTCCCGAA CGGCCAGGCG CCGGACAGCG AGAAGTTCAC CTACAAGATG
GCCTGGCTGC AGGCGCTGCG CGACTGGGTG CGCAGCGAGC TGGCCGCGCA CCCGCGGCTG
GTGCTGATGG GCGACTTCAA CATCGCGCCG GAAGACCGTG ATGTGCACGA CCCGGTGCTG
TGGGCCGGGC AGATCCATTG CACACCGCAG GAGCGTGAGC ACTTCCGCGA GTTGATCGCG
CTCGGCCTGG TCGATGCCTT CCGACTGTTC GAGCAGCCGC CCAAGAGCTG GAGCTGGTGG
GACTACCGCA ACCTGGCGTT CCGCAAGAAC CAGGGTCTGC GCATCGACCA CATCCTGGTC
AGCGAGGCGC TCCGACCCGC GGTGAGCGCC TGCATGATCG ACAAGCTGCC CCGCAAGAAC
GAGCGTCCGA GCGACCACGC GCCGGTGGTC GTGGAGTTGT CGACCGCGTA G
|
|---|
| Protein sequence | MRLATWNVNS LAVRLPQVLD WLTANPVDAL VLQETKLTDD KFPRAEIEAA GYAVQWFGQK
TYNGVALLSR EPAHDVTKNI FGFADEQARV IAGTVDGVRV IGAYFPNGQA PDSEKFTYKM
AWLQALRDWV RSELAAHPRL VLMGDFNIAP EDRDVHDPVL WAGQIHCTPQ EREHFRELIA
LGLVDAFRLF EQPPKSWSWW DYRNLAFRKN QGLRIDHILV SEALRPAVSA CMIDKLPRKN
ERPSDHAPVV VELSTA
|
|---|
| |