| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2022 |
|---|
| Symbol | |
|---|
| ID | 4784242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2163790 |
|---|
| End bp | 2164719 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640090592 |
|---|
| Product | tyrosine recombinase XerD subunit |
|---|
| Protein accession | YP_001021215 |
|---|
| Protein GI | 124267211 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCG AGCCACACGA CGAACTGCCC CCGCTGCCCG CCGACAGTGC GGTCGCGATC
GACGCCTTTC TCGAGGCGCT GTGGGTCGAG GACGGGCTGT CGGACAACAC CCTGGCCGCC
TACCGGCGCG ACCTGACGCT GTATGCGCGC TGGCTGGTCC ACGCCAGCGG CAAGCCGCTC
GACGGCAGCG GCGAGGCCGA CCTGCGCGCC TACGCGCTGG AGCGGCACGC CGGCACGCGT
GCGACCAGCG CGAACCGTCG GCTCACCGTC TTCCGGCGCT ATTTCCGCTG GGCGCTGCGC
GAGCATCGGC TGAGCGCCGA TCCGACCCTG AAGCTGCTGG CCGCGAAGCA GCCGCTGCGG
GTGCCCAAGA CGCTGAGCGA GGCGCAGGTG GAGGCGTTGC TGGAGGCGCC GGACGTCGAC
ACGCCGCTCG GCCTGCGCGA CCGGGCGATG CTGGAGATCC TGTACGCCAG CGGCCTGCGC
GTCAGCGAGC TGGTCACGCT GAAGAGCGTG AACGTGGGCT ACTCGGAGGC GGCCCTGCGC
GTCACCGGCA AGGGCAGCAA GGAGCGGCTG GTGCCGTTCG GCGAGGAGGC GCACGGCTGG
CTGATGCGCT ACCTGGCGGA GGCGCGCGCG GCCATCCTGG GCGGCCAGGC GAGCGACGCG
CTGTTCGTCA CCGCACGCGG CGGCCCGATG ACGCGGCAGG CGTTCTGGCA GCTGATCAAG
CGGCATGCGG GCGCCGCCGG CATCCAGGTG CCACTGTCGC CGCACACGCT GCGGCATGCG
TTCGCCACGC ACCTGCTCAA CCACGGCGCC GACCTGCGTG CGGTGCAGAT GCTGCTGGGC
CATGCCGACA TCTCCACCAC GACCATCTAC ACGCACGTGG CGCGCGAGCG GCTCAAGCAG
TTGCACTCAC AGCATCACCC GCGCGGCTGA
|
|---|
| Protein sequence | MSAEPHDELP PLPADSAVAI DAFLEALWVE DGLSDNTLAA YRRDLTLYAR WLVHASGKPL
DGSGEADLRA YALERHAGTR ATSANRRLTV FRRYFRWALR EHRLSADPTL KLLAAKQPLR
VPKTLSEAQV EALLEAPDVD TPLGLRDRAM LEILYASGLR VSELVTLKSV NVGYSEAALR
VTGKGSKERL VPFGEEAHGW LMRYLAEARA AILGGQASDA LFVTARGGPM TRQAFWQLIK
RHAGAAGIQV PLSPHTLRHA FATHLLNHGA DLRAVQMLLG HADISTTTIY THVARERLKQ
LHSQHHPRG
|
|---|
| |