Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2005 |
Symbol | |
ID | 4783792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2147972 |
End bp | 2149972 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640090575 |
Product | putative ATP-dependent DNA helicase-related protein |
Protein accession | YP_001021198 |
Protein GI | 124267194 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.349435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGG CCAACGGCAT GCGCAGCGAA CTGCAGAAGG CGGTGAGTGC GGCATTCGCG TTCGGCGGTC CGCTGCAGCG GGCTGATGCG CAGTACCGCG AGCGCGGCGC CCAGTTGGAG CTCGCCGCAG CCGTGGCCGA TGCGATCGAT GCGCGCGAGG TGCTGGTGGC CGAGGCCGGC ACAGGCGTCG GCAAGACGTT CGCCTACCTG GTCCCTGCGC TGCTGGCCGG GCATCGCACG CTGATCAGCA CCGCGACCAA GAGCCTGCAG GACCAGCTTT TCCTGCGCGA TCTGCCGCGG CTGCGCGAGG TGCTGGCCCT GCCGGTCAGC GTGGCCTTGC TGAAGGGACG CGGCAGCTAC CTGTGCCTGC AGCGGCTGGT GCTGGCCCGG GAGACGACGG CGCTGCCCGA CCGCTATGCG GCGCGCACGC TGGCGAAGAT CGAGCAGTGG GCGCAGCGCA CCGTGAGCGG CGACCTGGCC GAGCTCGAAG GCCTGGATGA GCGCTCGTCG GTGATCCCGC TGGTGACCTC GACGCGCGAG AACTGCCTCG GCAGCGAATG CCCGGAATAC CGCGGCTGCC ACGTGATGAA GGCCCGCCGC GAGGCGATGG CGGCCGACCT GGTGGTGGTC AACCACCACC TCTTCTTCGC CGACCTGTCG CTGCGCGACA CCGGCATGGC AGAGCTGCTG CCTTCCGTGG ACGTGGCGGT GTTCGACGAA GCGCATCAGC TTGCCGAGGC GGGCGTGGCC TTCCTCGGCA GCACGCTGGG CAGCGCCCAG GTGGTCGATT TCGCGCGCGA CATGCTGGCC GTCGGGCTGG CGCAGGCGCG CGGCCTGCAG CCTTGGCAGG ACCTGGCGGC AAGATGCGAC CGCGCGGCGC GCGATCTGCG CCTCGCGGCC AACGGGCCCC TTCGCGAGGT GCGCGGCAGC CTCAAGCTGC GCTGGGGCGA TCGCGCCGAC CGGGCCGACT TCATCGAGAC ACTCGCCGCG CTGGGGCAGG CCTGCCGGAG TGCGGCCGAC GCGCTCGACG TCGTGGCGGA GATGTCACCC GATCTGGCCA AGCTCGCGGA GCGGGCGTCG ACGCTGGCCG CCCGCGCCGC CGGCTTCGGG CTCGAGGCCG AGCCGGGGCG CGTGCGCTGG ATCGACCTCA CACCGCAGGG GCTGCGGCTG GTGGAATCCC CGCTCGACGT GCGCGACGCG ATGCGCGAGC AGATCGCGGC GGCGCCCAAG GCCTGGATCT TCACGTCGGC CACGCTCGGA GCCGACGAGC GGCTCACCTG GTTCACCGAG CAGGCCGGGT TGGAGACGGC GCGCACGCTG CGCGTCGACA GCCCCTTCGA CTACCCGATG CACGCGCGGC TCTACGTCCC CACGCGTTTC CCGAAGCCGA ACGAGCCGGG CCACACGGCG GCGGTTGCAC GCCTGGCGGC GGCCTGCGCG CGGGCCGCGG GGGGGCGCAC CTTCGTGCTG ACGACGACCC TGCGTGCGCT GTCCGGCGTG GGCGAGGCGC TGCAGTCCGA CTTCGAGGGC GATGCGGAGC CGATCACCGT GCTGATGCAG GGCAGCGGGC CCAAGCGCCA GCTGCTGCAG CGCTTCCTCG ACACACCTCG CGCGGTGCTG GTCGGTTCGC AGAGCTTCTG GGAAGGCATC GACGTGCCCG GCGAGGCACT GCAGTGCGTG ATCATCGACA AGCTGCCGTT CCCGCCGCCG AACGATCCGC TGGTCGAGGC GCGCGTGAAG CGGCTCGAGA GCGAGGGGCG CAACCCCTTC AACGACTACT TCGTGGCCGA GGCTGCGGTC TCGCTGAAAC AGGGGGCCGG CCGGCTGATC CGCAGCGAGA GCGATCGCGG TCTGCTGGTC GTGTGCGACC CCCGCATGGG CACGATGGGC TATGGACAGC GCATGAGGGC CGCTTTGCCG CCGATGCAGG TGCTGCGCGA GGAAGCGCAG GCGCTGGCGT GGTTGGCCGA GATATCGAAG GCGGCGTCGG CCTGGGCTTG A
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Protein sequence | MSPANGMRSE LQKAVSAAFA FGGPLQRADA QYRERGAQLE LAAAVADAID AREVLVAEAG TGVGKTFAYL VPALLAGHRT LISTATKSLQ DQLFLRDLPR LREVLALPVS VALLKGRGSY LCLQRLVLAR ETTALPDRYA ARTLAKIEQW AQRTVSGDLA ELEGLDERSS VIPLVTSTRE NCLGSECPEY RGCHVMKARR EAMAADLVVV NHHLFFADLS LRDTGMAELL PSVDVAVFDE AHQLAEAGVA FLGSTLGSAQ VVDFARDMLA VGLAQARGLQ PWQDLAARCD RAARDLRLAA NGPLREVRGS LKLRWGDRAD RADFIETLAA LGQACRSAAD ALDVVAEMSP DLAKLAERAS TLAARAAGFG LEAEPGRVRW IDLTPQGLRL VESPLDVRDA MREQIAAAPK AWIFTSATLG ADERLTWFTE QAGLETARTL RVDSPFDYPM HARLYVPTRF PKPNEPGHTA AVARLAAACA RAAGGRTFVL TTTLRALSGV GEALQSDFEG DAEPITVLMQ GSGPKRQLLQ RFLDTPRAVL VGSQSFWEGI DVPGEALQCV IIDKLPFPPP NDPLVEARVK RLESEGRNPF NDYFVAEAAV SLKQGAGRLI RSESDRGLLV VCDPRMGTMG YGQRMRAALP PMQVLREEAQ ALAWLAEISK AASAWA
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