Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1960 |
Symbol | uvrC |
ID | 4784746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2097535 |
End bp | 2099556 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640090530 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001021153 |
Protein GI | 124267149 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0403452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCG CTTCCCCCGA CGACACGGTA CCTCCGCCCG ACGCCGCCGC AACAGCGGCA GCCAGCGACG AGGCGCGGGA CCGCCTGGCG ATCGAGGTGG CGGCCTTGCC CAGCCTGCCG GGCGTCTACC GCTACTTCGA CGCGCAGGGG ACGCTGCTCT ATGTGGGCAA GGCCGGCAAC CTGAAGAAGC GGGTGTCGAG CTACTTTCAG AAGAACCATG GCGGCACGCG CACCGGCCAC ATGGTCGGCA GGATCGCTCG GCTGGAGACC ACGGTGGTGC GCTCCGAGGC CGAGGCGCTG CTGCTCGAGA ACAACCTGAT CAAGACGCTG AACCCGAAGT TCAACATCCT GTTCCGCGAC GACAAGAGCT ATCCCTACCT CAAGATCACC GGCGCCGCGG TCGCCGGCGG GCCGTCGCCT GCCGCTGGCA CGGCGGCCGC CGTCGACTAT CCGCGCATGG CCTACTACCG CGGTGGGGTC GACAAGCGGC ATCGCTACTT CGGCCCCTAC CCGAGCGCCT GGGCTGTGAA GGAATCGATC CAGTTGCTGC AGAAGGTGTT CCGCCTGCGC ACCTGCGAGG ACACGGTGTT CAACCACCGC ACGCGGCCCT GCCTGCTGTA CCAGATCAAG CGCTGCTCGG GGCCCTGCGT GCAGGCCATC GGGGCCGCGG ACTACGCACG CGATGTCCGC AACGCCGAGC GCTTTCTGCT CGGTGAGCAG CAGGAGGTGA TGGGTACGCT GCAGGCGCAG ATGATGGCGT ACGCCGATGC GCTGGAGTTC GAGAAGGCCG CCGAGATCCG GAATCAGCTC GGGGCCCTGT CGCGGGTGCT GCACCAGCAG TCGGTCGAGA CCAACGCCGA CGGCGCCTTC GACAAGGACG CCGACATCCT GGCCGCGGTG GTGCAGGGGG GGCGCGCCTG CGTCAATCTG GCCATGGTGC GGGGCGGCCG GCACCTGGGC GACCGGCCCT ATTTCCCGAC GCATGTCGAG GAGGCGAGTG CACTCGAGGG GATGGAGGAC GCCGCCGGGC CGGTCGCCGC GGTGGCCCCG CCCCAGGCCC GCGTCGAGGT GCGGGTACTG GAGGCCTTCA TCGCCCAGCA CTACCTCGAC GGTGCGCCAC CGCCACTGTT GATCACCAGC CATGCGATCG ACAAGGCGCT CGTCGAGGCG CTGACCGACG CCAGCGGCGT GCGCGTTACG GCCCAGCACC AGCCGCGCGA CCAGCGCCGG CAGTGGCTGG AGATGGCGGA GAAGAACGCA CGCATCAAGC TCACGCAGTT GCTGGGCGAG GAAGGCTCGC AGCAGGCCCG CACGCGGGCC CTGGTCGATG CGCTCGACCT GGCACCCGAC CAGCTGGAGC GCTTCCGCAT CGAATGCTTC GACATAAGTC ACACGGCCGG CGAGGCGACC CAGGCCTCGT GCGTGGTATT CGAGGAGCAC AAGATGCAGC CGGCCCAGTA CCGGCGTTAC AACATCACCG GCATCACCCC CGGCGACGAC TACGCGGCCA TGCGCCAGGT GCTGACGCGC CGCTACGCCA AGCTCGCCGA GGCATCCGCC CAGGGAACGG CGCGGCTGCC CGACCTCGTG CTGGTGGACG GCGGCAAGGG CCAGGTGGCG ATGGCGCGCG ACGTGTTCGA GGAGCTCGGG CTCGACCTGT CCCTGATCGT CGGGGTCGAG AAGGGGGAAG GCCGCAAGGT CGGCCTGGAA GAACTGGTAT TCGCCGATGG CCGCGCCAAG GTCTACCTTG GCAAGGACTC GGCCGCGCTG ATGCTGGTGG CACAGATCCG TGACGAGGCC CACCGCTTCG CGATCACCGG CATGCGCGCC CGGCGTGCCA GTGTGCGCAC CGGCGGCAGC CGGCTGGAGG ACATCGCCGG CATCGGGCCC AAGAAACGTG CGAAGCTGCT GCAGCGCTTC GGCGGCGCAC GCGGCGTGGC CAGTGCGAGC GTGGACGACC TGTCGAGCGT CGATGGCATT TCGAGAGAAC TGGCGGAGGA GATCTACCGT GTCCTGCACT GA
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Protein sequence | MTAASPDDTV PPPDAAATAA ASDEARDRLA IEVAALPSLP GVYRYFDAQG TLLYVGKAGN LKKRVSSYFQ KNHGGTRTGH MVGRIARLET TVVRSEAEAL LLENNLIKTL NPKFNILFRD DKSYPYLKIT GAAVAGGPSP AAGTAAAVDY PRMAYYRGGV DKRHRYFGPY PSAWAVKESI QLLQKVFRLR TCEDTVFNHR TRPCLLYQIK RCSGPCVQAI GAADYARDVR NAERFLLGEQ QEVMGTLQAQ MMAYADALEF EKAAEIRNQL GALSRVLHQQ SVETNADGAF DKDADILAAV VQGGRACVNL AMVRGGRHLG DRPYFPTHVE EASALEGMED AAGPVAAVAP PQARVEVRVL EAFIAQHYLD GAPPPLLITS HAIDKALVEA LTDASGVRVT AQHQPRDQRR QWLEMAEKNA RIKLTQLLGE EGSQQARTRA LVDALDLAPD QLERFRIECF DISHTAGEAT QASCVVFEEH KMQPAQYRRY NITGITPGDD YAAMRQVLTR RYAKLAEASA QGTARLPDLV LVDGGKGQVA MARDVFEELG LDLSLIVGVE KGEGRKVGLE ELVFADGRAK VYLGKDSAAL MLVAQIRDEA HRFAITGMRA RRASVRTGGS RLEDIAGIGP KKRAKLLQRF GGARGVASAS VDDLSSVDGI SRELAEEIYR VLH
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