| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1940 |
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| Symbol | |
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| ID | 4786701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2076133 |
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| End bp | 2077260 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640090510 |
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| Product | putative secreted substrate binding protein |
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| Protein accession | YP_001021133 |
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| Protein GI | 124267129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.15659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0532415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCA AACTCAAAGC CATCGCCCTT GCAACGGCCC TGCTCGCGAC CGGCGCCGTC
TCGGCCCAGG AAGTGATCAA GATCGGCCAC GTCGCCCCCA TCTCCGGTGC CCAGGCCCAC
TACGGCAAGG ACAACGAGAA CGGCGCCCGG ATGGCGATCG AGGAACTCAA CACCCAGAAC
ATCACGATCG GTGGCAAGAA GGTCAAGTTC GAACTGGTTG CGGAAGACGA CGCTGCCGAC
CCGAAGCAGG GCACGGCCGC CGCCACCAAG CTGTGCGATG CCAAGGTCAA CGGTGTGGTC
GGTCACCTGA ACTCCGGCAC CACCATTCCC GCCTCGAAGA TCTACAACGA CTGCGGCATT
CCTGAGATCA CCCCGTCGGC CACGAACCCC AAGTACACGC AGCAGGGCTT CAAGACCGCT
TTCCGCATCC TGGCCAACGA CAACGCGCTC GGCGCCGGCC TGGCTTTGCA CGCCGCCAAC
AACCTGAAGC TCAAGAAGGT CGCGATCATC GATGACCGCA CTGCCTACGG GCAGGGTGTG
GCCGAGGTGT TCAAGAAGAC TGCCCAGGCC AAGGGCATCC AGATCGTCGA TGAGCAGTAC
ACCACCGACA AGGCCACCGA TTTCATGGCG ATCCTGACCT CGATCAAGTC GAAGGGTCCG
GATGGCGTGT TCTACGGCGG CATGGACCCG CAAGCCGGCC CGATGCTGCG CCAGATGGAG
CAACTCGGCC TGTCGAACGT CAAGTTCTTC GGCGGCGACG GCGTGTGCAC CGCCAAGCTC
GCCGACCTGT CGGCCGGCGC CAAGACGCTG GGCAACGTGG TCTGCGCCGA AGGCGGCTCC
TCGCTCGAGA AGATGCCCGG CGGTACCGCC TGGAAGGCCA AGTACGACGC GAAGTATCCC
GGCCAGTTCC AGGTCTACTC GCCCTACGTC TACGACGCGG TATTCGTGCT GGTCGACGCC
ATGAAGCGCG CCAACTCGGC CGACCCCAAG GTCTACGGCC CGAAGCTGTT CGAAACCAAC
TACACCGGCG TGACCGCGAA GGTGGCCTTC GAGAGCGATG GTGAACTGAA GAACCCGGCG
ATGACCCTGT ACGTCTACAA GGACGGCAAG AAGGTCCCGC TGAACTGA
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| Protein sequence | MQLKLKAIAL ATALLATGAV SAQEVIKIGH VAPISGAQAH YGKDNENGAR MAIEELNTQN
ITIGGKKVKF ELVAEDDAAD PKQGTAAATK LCDAKVNGVV GHLNSGTTIP ASKIYNDCGI
PEITPSATNP KYTQQGFKTA FRILANDNAL GAGLALHAAN NLKLKKVAII DDRTAYGQGV
AEVFKKTAQA KGIQIVDEQY TTDKATDFMA ILTSIKSKGP DGVFYGGMDP QAGPMLRQME
QLGLSNVKFF GGDGVCTAKL ADLSAGAKTL GNVVCAEGGS SLEKMPGGTA WKAKYDAKYP
GQFQVYSPYV YDAVFVLVDA MKRANSADPK VYGPKLFETN YTGVTAKVAF ESDGELKNPA
MTLYVYKDGK KVPLN
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