Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1939 |
Symbol | |
ID | 4786700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2075421 |
End bp | 2075906 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640090509 |
Product | hypothetical protein |
Protein accession | YP_001021132 |
Protein GI | 124267128 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00420129 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00989938 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGATCCCAT GTTGTGGATA CCGCTGCGGT CCAGCACCAT CTGAGCACAA GTCAATCCGC AGGTGCGGTT CTGTGGGCGC CGCAAGTAGG CGCTCGAATC GCATGCAGCA AGGGGGAGGT GAGATGACCA AGGCCGTTGA CAGGGGCGCG ATGCTTAACC ATGTGTATGG CCTTGCTGGG CTGATTCCGG CCTTGATTGG TTTGGTCTTC CTTGTGAAAA ATGATGCGTC TTGGTACGAG TACGCGTTAC TTGGGTCAGG TTGGTTTGCA GCGATCATCT ACGGGCTGAT GCTGGTAAAA GCATTTCACG TTGCTCGCGC TGATGGCGAA CTGATTGGAC GACTAACCGT TGAGCTCGAA GGGCTCAAGC GTGAAATGTC ATCTCGAAAC GCAACACTGG ACTATCTGGC TTCTTTGCAA ATGGGGCGAG TTGCCACACC GCGCGCGATG ACCGTGCAGC CGCACGAGGA TGGGGAGGCA ATGTGA
|
Protein sequence | MIPCCGYRCG PAPSEHKSIR RCGSVGAASR RSNRMQQGGG EMTKAVDRGA MLNHVYGLAG LIPALIGLVF LVKNDASWYE YALLGSGWFA AIIYGLMLVK AFHVARADGE LIGRLTVELE GLKREMSSRN ATLDYLASLQ MGRVATPRAM TVQPHEDGEA M
|
| |