| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1925 |
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| Symbol | |
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| ID | 4786686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2064818 |
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| End bp | 2067079 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640090495 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001021118 |
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| Protein GI | 124267114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00506888 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCACT TTCGTTTCCC CATCGTCATC ATCGACGAGG ACTTTCGCTC CGAGAACACC
TCCGGACTGG GCATCCGTGC GCTGGCGGAC GCGATCGTCA AGGAAGGCTT CGAGATCCTG
GGCGTCACCA GCTACGGCGA CCTGAGCCAG TTCGCCCAGC AGCAGAGCCG CGCCAGTGCT
TTCATCCTGT CGATCGACGA CAACGAGTTC ACCCACGAGG GGCCCGAACT CGCGCCGGCC
GTGCTGAACC TGCGCCAGTT CATCCGCGAG ATCCGCCGCA AGAACCTGGA GATTCCGATC
TACCTTTACG GCGAGACCCG CACCTCGCAA CACCTGCCCA ACGACGTGCT GCGCGAGCTG
CACGGCTTCA TCCACATGTT CGAGGACACG CCCGAGTTCG TGGCCCGCCA CATCATCCGC
GAGGCCAGGA GCTATCTCGA CGGCCTGGCG CCGCCATTCT TCAAGGCATT GGTCGACTAC
GCGCAGGACG GTTCCTATTC CTGGCACTGC CCTGGCCACA GCGGCGGCGT GGCGTTCCTG
AAGAGCCCGG TCGGGCAGAT GTTCCACCAG TTCTTCGGCG AGAACATGCT GCGCGCCGAC
GTCTGCAACT CGGTCGACGA GCTCGGTCAG TTGCTCGACC ACACCGGCCC GGTGGCTCAG
AGCGAGCGCA ATGCGGCCCG CATCTTCAAC GCAGACCACT GCTTCTTCGT CACCAACGGC
ACCAGCACCA GCAACAAGAT GGTCTGGCAC CACACCGTGG CGCCCGACGA CGTGGTGGTG
GTGGACCGTA ACTGCCACAA GTCCATCCTG CACGCGATCA TCATGACCGG CGCGGTGCCG
GTGTTCCTGC CGCCGACGCG CAACCACCTG GGCATCATCG GCCCGATCCC GAAGGCCGAG
TTCGAGCCCG CGGCGATCCG CAAGCGCATT GCCGCCAACC CGCTGCTCGC GCATGTGGAC
CCGGCCACCG TCAAGCCGCG CATCCTGACG TTGACGCAAA GCACCTACGA CGGCGTGCTC
TACAACACCG AGACCATCAA GGGACTGCTC GACGGCTGGA TCGACACGGT GCATTTCGAC
GAGGCCTGGC TGCCTCACGC TGCCTTCCAC AAGTTCTACG GCAGCTACCA CGCGATGGGC
AAGAACCGTC CGCGGCCGAA GGAAGCGGTG GTCTATGCCA CGCAGTCGAC CCACAAGCTG
CTGGCCGGCA TCAGCCAGGC TTCTCAGGTG CTGGTGCAGG ATGCCCAGAA CACCAAGCTC
GACCGCCACC TGTTCAACGA AGCCTATCTG ATGCATACCT CGACGTCGCC GCAGTACGCG
ATCATCGCGA GCTGCGACGT CGCGGCGGCG ATGATGGAGC CCCCCGGAGG AACCGCACTG
GTGGAGGAGA GCATCCAGGA AGCGCTCGAC TTCCGGCGTG CGATGCGCAA GGTCGACAAG
GAATTCGGCA AGGACTGGTG GTTCAAGGTC TGGGGCCCCG ACAAGCTGGC CGAGGACGGC
ATCGGCAAGC CCGAGGACTG GATGATCAAG GCCGACGCCA AGTGGCACGG CTTCGGTCCG
CTGGCCGAAG GCTTCAACAT GCTCGACCCG ATCAAGTCGA CGCTTGTGAC GCCGGGACTC
GACGTGGCCG GCAAGTTCGC CAAGACCGGC ATCCCGGCCT CGATCGTCAC CAAGTTCCTG
GCCGAGCATG GCGTGATCGT CGAGAAGACC GGGCTGTACT CGTTCTTCAT CATGTTCACG
ATCGGCATCA CCAAGGGCCG GTGGAACACG CTGCTGACCG CGCTGCAGCA GTTCAAGGAC
GACTACGACA AGAACGCGCC GCTATGGCGC ATCCTGCCGG AGTTCTGCGC CGCCCACCCG
CGCTACGAGC GCATGGGGCT GCGCGACCTA GCGCAGAGCA TCCACGAGGC CTACGTCAAG
GGCGATATCG CCCGGCTGAC CACCGAGATG TACCTGTCGG ACCTGCAGCC GGCGATGAAG
CCCAGTGAGG CCTACGCCCA CATCGCGCAC CGCAAGACCG AGCGAGTGGA GATCGAGAGC
CTGGAAGGGC GCATCACCAC CTCGCTGCTG ACACCCTATC CACCGGGCAT CCCGCTGCTG
ATCCCGGGCG AGCGCTTCAA CAAGAAGATC GTCGACTACC TGCGCTTCAC CCGCGACTTC
AACCGTCGAT TCCCCGGTTT CGACACCGAT GTGCACGGTT TGGTCGAGGA GGAAACCGAC
AGCGGCGAGC GCCGCTACGC CGTGGACTGC GTGAAGCAGT GA
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| Protein sequence | MQHFRFPIVI IDEDFRSENT SGLGIRALAD AIVKEGFEIL GVTSYGDLSQ FAQQQSRASA
FILSIDDNEF THEGPELAPA VLNLRQFIRE IRRKNLEIPI YLYGETRTSQ HLPNDVLREL
HGFIHMFEDT PEFVARHIIR EARSYLDGLA PPFFKALVDY AQDGSYSWHC PGHSGGVAFL
KSPVGQMFHQ FFGENMLRAD VCNSVDELGQ LLDHTGPVAQ SERNAARIFN ADHCFFVTNG
TSTSNKMVWH HTVAPDDVVV VDRNCHKSIL HAIIMTGAVP VFLPPTRNHL GIIGPIPKAE
FEPAAIRKRI AANPLLAHVD PATVKPRILT LTQSTYDGVL YNTETIKGLL DGWIDTVHFD
EAWLPHAAFH KFYGSYHAMG KNRPRPKEAV VYATQSTHKL LAGISQASQV LVQDAQNTKL
DRHLFNEAYL MHTSTSPQYA IIASCDVAAA MMEPPGGTAL VEESIQEALD FRRAMRKVDK
EFGKDWWFKV WGPDKLAEDG IGKPEDWMIK ADAKWHGFGP LAEGFNMLDP IKSTLVTPGL
DVAGKFAKTG IPASIVTKFL AEHGVIVEKT GLYSFFIMFT IGITKGRWNT LLTALQQFKD
DYDKNAPLWR ILPEFCAAHP RYERMGLRDL AQSIHEAYVK GDIARLTTEM YLSDLQPAMK
PSEAYAHIAH RKTERVEIES LEGRITTSLL TPYPPGIPLL IPGERFNKKI VDYLRFTRDF
NRRFPGFDTD VHGLVEEETD SGERRYAVDC VKQ
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