| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1807 |
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| Symbol | |
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| ID | 4786806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1945113 |
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| End bp | 1946315 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640090378 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001021001 |
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| Protein GI | 124266997 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCC TGCTTTCCCG CTTGCAGCCC TACCCGTTCG AGCGGCTGCG CGAACTGACC
CGCGACGTGC TGCCGAATCC GGCGCTGCGG CCCATCAGCC TCGGTATCGG CGAGCCCAAG
CATCCGACGC CTCCCTTCAT CCGCGAGGCG CTCACTGCAG CGTTGGACGG CCTGGCCAGC
TACCCGGCCA CGGCCGGCGA GCCGGCGCTG CGCGAGGCGT GCGCCGCCTG GGTGCACCGG
CGCTACGGCG TCACGCTCGA CGCGTCGACG CAGCTGCTGC CGGTCAACGG CTCGCGCGAG
GCCCTGTTCG CACTGGCGCA GACCGTCATC GACCCCACGC GCCCCGGCGC CACCGTCGTC
TGCCCCAACC CGTTCTATCA GATCTACGAA GGCGCGGCGC TGCTCGCCGG TGCGCAGACG
GTGTTCGCCA ACAGCGACCC GGCGCGCAAT TTCGCGGTGG ACTGGTCGGC CATCGACGAC
GCCACCTGGG CCCGCACCCA ACTGCTCTAC GTCTGTTCGC CGGGCAACCC GACCGGCGCG
GTGATGCCGC TCGACGAATG GCAGCGGCTG TTCGAGCTGT CGGACCGGCA TGGCTTCGTG
ATCGCCTCCG ACGAGTGCTA CTCGGAAATC TACTTTCGTG ACGAGCCACC GCTCGGCAGC
CTGCAGGCCG CGCTGGCGCT GGGGCGCAGC GACTTCCGGC GCCTGATCGC CTTCACCAGC
CTGTCCAAGC GTTCCAACGT GCCGGGGCTG CGCTCGGGCT TCGTGGCCGG CGACGCGGCA
ATCCTGAAGG CCTTCCTGCT GTACCGCACC TACCACGGTG CCGCCATGGG CCCGGCGGTG
CAGCGCGCCA GCCTCGCGGC CTGGGGCGAC GAGGCCCACG TGGCGGCCAA CCGGGCGCTC
TACCGCCAGA AATTCGAGCA AGTGACGCCG AGGCTCGCCA GCGTGCTGGA CGTCGCGCTG
CCCGATGCCG GCTTCTACCT GTGGGCCAGG TTGCCGGCGG CCGTCTGCGG CGGCAGCGAC
ATCCGCTTCG CCCGCGAGCT GCTCGCTCAA TACAATGTGG CGGTGCTGCC CGGCAGCTAC
CTCGCCCGCG AGGCGCAGGG CACGAACCCT GGCCAGGGGC GCATCCGCAT GGCGCTCGTG
GCCGGCATCG ACGAATGCGT CGAAGCGGCC GAACGCATCG TTTCCTTCAT CCAGTCCAGC
TGA
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| Protein sequence | MNPLLSRLQP YPFERLRELT RDVLPNPALR PISLGIGEPK HPTPPFIREA LTAALDGLAS
YPATAGEPAL REACAAWVHR RYGVTLDAST QLLPVNGSRE ALFALAQTVI DPTRPGATVV
CPNPFYQIYE GAALLAGAQT VFANSDPARN FAVDWSAIDD ATWARTQLLY VCSPGNPTGA
VMPLDEWQRL FELSDRHGFV IASDECYSEI YFRDEPPLGS LQAALALGRS DFRRLIAFTS
LSKRSNVPGL RSGFVAGDAA ILKAFLLYRT YHGAAMGPAV QRASLAAWGD EAHVAANRAL
YRQKFEQVTP RLASVLDVAL PDAGFYLWAR LPAAVCGGSD IRFARELLAQ YNVAVLPGSY
LAREAQGTNP GQGRIRMALV AGIDECVEAA ERIVSFIQSS
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