Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1805 |
Symbol | |
ID | 4786804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1943048 |
End bp | 1944226 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640090376 |
Product | hypothetical protein |
Protein accession | YP_001020999 |
Protein GI | 124266995 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00695665 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAA ACATGGAGCG GGTGCTGCGG CTGATGGCCG AGAAGCGGGC CTCGGATGTC TACCTCACGG CCAACGCGCC GATCCAGATC AAGATCAACG GCCAGCTGCT GCAGCTGTCC GACCAGTCGC TCACGCCGGA GCAGCCGCGG CAGCTGCTGG CCGAGCTGCT GACACCCAAG CAGCTCGAGG AGCTGGAGGA GCTGGGCGAG CTGAACATGG GCGTCGGCCT GCAGGGCGTC GGCAGCTTCC GGCTCAGCGC CTTCCGGCAG CGCGGCTCCA TCGCCGCGGT GTTCCGCTGC ATCCCGGTGG AGATCCCGAC GCTCGATTCG CTGAAGCTGC CGGAGATCCT GAACACGCTG ATCCTCGAGA AGCGCGGCCT GATCCTGCTG GCCGGCGCCA CCGGCACCGG CAAGAGCACG ACGCTCGCCG CGATGCTGGA GCACCGCAAC CGCAACCTCG CCGGCCACAT CCTCACCATC GAGGACCCGA TCGAGTTCCT GTTCACCAAC AAGAAGGCGA TCGTCAACCA GCGCGAGGTG GGTCGCGACA CGCAGTCGCT GCAGATCGGT CTGAAGAACG CGCTGCGCCA GGCGCCCGAC TGCATCCTGA TCGGCGAGAT CCGCGACCGC GAGACCATGA CCGCGGCGAT TTCCTATGCG CTGTCGGGGC ACCTGGTGGT CTCGACGCTG CACGCCAACA ACAGCTACCA CGCGCTGGGC CGCATCCTGA GCTTCTACAC GCCCGAGGCG CGCCCGGCCC TGCTGGGCGA CCTGTCCTCC GCACTCAAGG CCGTGGTGTC GCAGCGCCTG GTGCGCTCGA CCCAGGGCGG GCGGGTGCCG GCCGTCGAGG TGCTGCTCAA CACCAAGCTG GTGGCCGACC TGATGGCGCA GGGCGATTTC CCGGGCGTCA AGGAGGCGAT GGAGCAGTCG CTGGCCGAGG GCTCGCAGAC CTTCGAGCAG GAGCTCGCCC GCCTGATCAA CGACGGCGTG ATCACCCGCG ACGAGGGTCT GAGCTATGCC GATTCGCCCA CCAACCTGAT GTGGCGGCTG CAGAACGACA GTCCCACGCA GTCGAAGCTG GTGCCGAAGA AGGAAGAGAA GGACGAGGGC CCGTCCTTCA CCGACATCAC GCTCGACGTG CGGCAGGACG ATCGCCGCAC GAACTTCGGC GCGCTGTGA
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Protein sequence | MSGNMERVLR LMAEKRASDV YLTANAPIQI KINGQLLQLS DQSLTPEQPR QLLAELLTPK QLEELEELGE LNMGVGLQGV GSFRLSAFRQ RGSIAAVFRC IPVEIPTLDS LKLPEILNTL ILEKRGLILL AGATGTGKST TLAAMLEHRN RNLAGHILTI EDPIEFLFTN KKAIVNQREV GRDTQSLQIG LKNALRQAPD CILIGEIRDR ETMTAAISYA LSGHLVVSTL HANNSYHALG RILSFYTPEA RPALLGDLSS ALKAVVSQRL VRSTQGGRVP AVEVLLNTKL VADLMAQGDF PGVKEAMEQS LAEGSQTFEQ ELARLINDGV ITRDEGLSYA DSPTNLMWRL QNDSPTQSKL VPKKEEKDEG PSFTDITLDV RQDDRRTNFG AL
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