| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1804 |
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| Symbol | |
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| ID | 4786803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1941874 |
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| End bp | 1943034 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640090375 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001020998 |
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| Protein GI | 124266994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0689482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCC TGCCCCCGAC GGCGCTTGCG CTCGCCGAGC AACTGATCGC GCGCGCTTCC
GTCACGCCCG AGGACGCCGG ATGCCAGGCG CTGGTCGTGC AGCGGCTCCA GGCGCAGGGC
TTCGACTGCC ACACGCTCGA GAGCGGCCCG GACGACTTCC GCGTCACCAA TCTGTGGGCC
GTGCGCCGCG GCCGTTCCGC CGACGGCTTC ACGCTCGTGT TCGCCGGCCA CACCGACGTG
GTGCCCACCG GCCCGCTGGA GCGCTGGACC AGCGACCCGT TCGTGCCCAG CCACCGCGAT
GGCCGTCTCT ACGGGCGCGG CGCGGCCGAC ATGAAAACCT CGATCGCCTG CATGGTGGTC
GCGATCGAGG AATTCGTCGC GGCGTATCCC CGACACGCTG GTTCGATCGC GCTGCTGCTG
ACCAGCGATG AGGAAGGCCC TGCGCTCGAT GGCACCACGC AGGTGGTGCG CTGGCTGCAG
GCGCGCGGCG AGCGGCTCGA CGGCTGCATC GTCGGCGAAC CGACCTCGGT GAACGCGGTG
GGCGACATGA TCAAGAACGG CCGCCGCGGC TCGCTGTCGG GCCGGCTGGT CGTGCAAGGC
GTGCAGGGTC ACATCGCCTA CCCGCACCTG GCGAAGAACC CGATCCACGC GGTGGCGCCG
GCGCTGGCCG AGCTGGTGCA AGTGGTCTGG GACGGCGGCA ACGAACATTT CCCGCCGACC
AGCTGGCAGG TCTCGAACCT GCACGCGGGC ACCGGCGCGA GCAATGTCAT CCCGGGTGAG
GCGGTGGTCG ACTTCAACTT CCGTTTCTCG ACCGAATCGA CGCCGGAGAC CCTGCAGCAG
CGCCTCGCCG CGGTGCTGGA CCGCCACGGC CTGCAGTACA CGATCGACTG GACGCTGGGC
GGTCGGCCCT TCCTCACGCG CCCCGGCAGC CTGACCGAGG CGCTGGGCAG CGCGATCTTG
CAGGTGACCG GCCGCACGAC CGAGCTGTCC ACCACCGGCG GCACCTCCGA CGGCCGCTTC
ATCGCCACCG TCTGCCCGCA GGTGGTCGAA TGCGGGCCGG TCAATGCCAG CATCCACCAG
ATCGACGAGC ACGTCGCGGT GGCCGAGATC GAGCCGCTGA AGGAGATCTA CCGCAGCACG
CTCGAGCGTC TGGTCGCATG A
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| Protein sequence | MSALPPTALA LAEQLIARAS VTPEDAGCQA LVVQRLQAQG FDCHTLESGP DDFRVTNLWA
VRRGRSADGF TLVFAGHTDV VPTGPLERWT SDPFVPSHRD GRLYGRGAAD MKTSIACMVV
AIEEFVAAYP RHAGSIALLL TSDEEGPALD GTTQVVRWLQ ARGERLDGCI VGEPTSVNAV
GDMIKNGRRG SLSGRLVVQG VQGHIAYPHL AKNPIHAVAP ALAELVQVVW DGGNEHFPPT
SWQVSNLHAG TGASNVIPGE AVVDFNFRFS TESTPETLQQ RLAAVLDRHG LQYTIDWTLG
GRPFLTRPGS LTEALGSAIL QVTGRTTELS TTGGTSDGRF IATVCPQVVE CGPVNASIHQ
IDEHVAVAEI EPLKEIYRST LERLVA
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