| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1791 |
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| Symbol | mdoD |
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| ID | 4784458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1925594 |
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| End bp | 1927171 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090362 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001020985 |
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| Protein GI | 124266981 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.315041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAC GACAACTGCT GCGCGGCATG GCCGCGTCGG CCACGCTCCA GGCCCTGCTG
GGCGGTGACG CTGCCGCAGC GGGCCTGAAG GCGATCGGCC AGGCCGAGGC CTTCGACTAC
GCGCTGCTCA AGGGCCGCGC TCGTGCGCTG GCTGCCAAGG CCTACCAGGC GCCGCGGTCG
GTGCTGCCGA AGGCGATCGA CTCGCTCGAC TGGGACCGCC ACCAGGCCAT CCGCTTCCGA
CCCGACCACG CCTTGTGGGG CGAAGACGAG CTGCGCTTCC GGGTGCAGTT CTTCCATCTG
GGGCTGTTCT TCAAGTCGCC GGTGCGCATT CACGAGCTGG TGGACGGCCG GGCCCGCGAA
CTGGCCTACG ACGCCGAGAT GTTCGACTAC GGCAAGAGCG GGGTTCAGGG CAGTCAATTG
CCGAGCGACC TGGGCTTCGC CGGCTTCCGG CTGAACTTCC ACACCGATCT CGAGCGCGAC
ATCTCGGCCT TCCTGGGCGC GAGCTACTTC CGCGCGGTCG GCGGGGAATG GCAGTACGGT
CTGTCGGCGC GCGGCTTGGC CGTCGATACC GGCCTGCCGC GACCGGAGGA GTTTCCGAAC
TTCGTCGCCT TCTGGCTGGA GAAGCCGGCG CGCCAGTCGA GCAGCATCAC GGTGTATGCG
CTGCTCGATT CGCCCAGCAT TGCCGGGGCC TACCGTTTCG TCATCACGCC GGGCGACACG
CAGGTGATGG ACATCGATGC GGCGCTCTAC CCGCGCAAAC CCATCGAGCG CCTGGGCATC
GCGCCGCTGA CCAGCATGTT CCAGTACGGC GAGAACGACC GCCGCGTCGC CAACGACTGG
CGGCCCGAGG TGCACGACAG CGACGGCCTG CAGATGTGGA CCGGCAGCGG CGAGTGGATC
TGGCGCCCCC TCACCAATCC CGCCACGCTG CGCTTCAACG CCTACCAGGA CGAGAATCCG
CGCGGCTTCG GCCTGCTGCA GCGTGACCGC AACTTCGACC ACTACCAGGA CGACGGCGTG
TTCTACGACA AGCGGCCCTG CGTGTGGGTG GAACCGAAGT CGGGCTGGGG CGCCGGCTCG
CTGCAGCTGG TGGAGATCCC GACCGCCGAC GAGACCTTCG ACAACATCGT CGCGTTGTGG
AATCCGGCGC GCCCACCGCA GGCCGGCGAG GAACTGCTGT TCGCCTACCG CCTCTACTGG
GGCGCGCAGC CGCCGGCCCG GCCGCCGCTC GCGCGCTGCG TGGCCACGCG CACCGGCCTG
GGCGGTGTGA TCGGTCAGCC GCGCAAGTAT TTCTCGTGGC GGTTCGCGGT CGATTTCTCC
GGCGGCGACC TGTCGCTGAT CGGGCCGAAG GCCAAGGTCG AGGCCGTCGT CAGCGCCTCG
CGTGGCCGCG TGGAGATCAC GTCGGCGCGG CCCTTGGCCT CGGTCTCGGG CTACAGGGCG
ATGTTCGACG TGGTGCCGCC GGCCGGCACC GAGCCGATCG ACCTGCGCGT CTACCTGCGC
TGCGACGGCC AGTCGCTCAG CGAGACCTGG CTCTACCAGT GGAGCCCGCC GCCCGCGGCC
GAACGCAAGC TGGTCTGA
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| Protein sequence | MQRRQLLRGM AASATLQALL GGDAAAAGLK AIGQAEAFDY ALLKGRARAL AAKAYQAPRS
VLPKAIDSLD WDRHQAIRFR PDHALWGEDE LRFRVQFFHL GLFFKSPVRI HELVDGRARE
LAYDAEMFDY GKSGVQGSQL PSDLGFAGFR LNFHTDLERD ISAFLGASYF RAVGGEWQYG
LSARGLAVDT GLPRPEEFPN FVAFWLEKPA RQSSSITVYA LLDSPSIAGA YRFVITPGDT
QVMDIDAALY PRKPIERLGI APLTSMFQYG ENDRRVANDW RPEVHDSDGL QMWTGSGEWI
WRPLTNPATL RFNAYQDENP RGFGLLQRDR NFDHYQDDGV FYDKRPCVWV EPKSGWGAGS
LQLVEIPTAD ETFDNIVALW NPARPPQAGE ELLFAYRLYW GAQPPARPPL ARCVATRTGL
GGVIGQPRKY FSWRFAVDFS GGDLSLIGPK AKVEAVVSAS RGRVEITSAR PLASVSGYRA
MFDVVPPAGT EPIDLRVYLR CDGQSLSETW LYQWSPPPAA ERKLV
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