Gene Mpe_A1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1753 
Symbol 
ID4784211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1880627 
End bp1882513 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content73% 
IMG OID640090323 
ProductATPase component ABC-type dipeptide/oligopeptide/nickel transport system 
Protein accessionYP_001020947 
Protein GI124266943 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.813724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTG CGCCTGCAGA CACCCTGTCC ATCGAGGCGC TGCACGTCGC GCTCGACGCC 
GACGCCGGCC TGGTGCGCGC GATCGACGGC CTGAGCCTGG CGATCACGCG TGGCGAGACC
TTCGCGCTGG TGGGCGAGTC GGGCTGCGGC AAGAGCATGA CGGCGTTGGC GCTGATGCGG
TTGCTGCCCG AGAACGGCCG CGTCACCGCG GGCTCGGTGC GGCTGGGCGG CGAGGAACTG
CTGGACCTGC CGGAGTCGCG CATGCGGGCG GTGCGCGGTG CGCGCGTCGG CATGATCTTC
CAGGAGCCGG CGACCAGCCT GAACCCGGTG ATGCGGATCG GCACGCAGAT CGTCGAAGCG
ATCGAGGCGC ACACGGCGCT GCGCGGCGCG GCAGCGCGGG CCAAGGCGCT GGACTGGCTG
AAGCGCGTGG GCATCCCCGA GCCCGAGAGG CGCATCGACG ACTACCCGTT CCGCCTGAGC
GGCGGGCAGA AGCAGCGCGT GATGATCGCC ATCGCGCTGG CCGCCGAGCC CGAGTTCCTG
GTGGCCGACG AGCCGACCAC CGCACTCGAC GTCACGATCC AGAAGCAGAT CCTCGACCTG
CTGCGCGAAC TGCAGCGCGA GCGCGGACTG GGGCTGATGC TGATCACGCA CGACCTCGGC
GTGGTGGCCG GCATGGCGCA GACGGTGGCG CTGATGTATG CCGGCCAGAT CGTCGAGGTG
GCGAGCGCGA AGGACTTCTT CGCCCACCCG CGCCACCCCT ACGCCCGGCT GCTGTTGCGC
GCCGTGCCCG ACGCCAGCCA GCGCGGCGGC GAGCTCGCGG CGATCGCCGG CAGCGTGCCG
CCGCTGTGGC GGCGCTTCGA GGGCTGCCGC TTCGCCGACC GCTGCGACCG CGTGTTCGAT
CGCTGCCACG GTACCGAGCC GCCGCTGATC GAGACCGCGG CCGGCCATCA GGTGCGCTGC
CTGCTGTATG TCGACGGCGC ATCGCCGCCC GGGTCGGCGC CGGCCACGAC AGCGATCGAC
GCGCCTGCGG CCCGGCCGGC GCCGGCCGAG CCCTCGCTGC TGCTGGACGT GCAGAACCTC
GTGGTGCGTT TCCCGGTGCG CGGCGGGCTG CTGCAGCGCG CCCGCTCGCA CGTGACGGCG
GTCGACGGCG TGTCGTTCCG GCTCGACGCC GGGCGCACGC TGGCGCTGGT GGGCGAGTCG
GGTTGCGGCA AGACGACGAT CGGCAAGGCC CTGCTGCAGC TGCTGCGCGG CACGGCGGCG
GTCGAGGGCC GGGCGCTGTG GCGAGGCGAG GACCTGTTCT CGCTTCAGGG TGATGCGCTG
CGGCGGGCGC GCCGCGAGAT CCAGATCGTG TTCCAGGACC CGTTCGCGTC GCTCGACCCG
CGCATGCGGG TGTTCGAGGC GCTGGAGGAG GGCCTGGTTG CACTGCGGCC CGAACTCGAC
CGTGCCGCGC GCCGCGCGCG CATCGAGACG CTGGTCGAGC GCGTCGGCCT GCGCCGCGAC
GCACTGGAGC GCTGGCCGCA CGAGTTCTCG GGCGGCCAGC GCCAGCGCAT CGCGATCGCG
CGGGCGCTGG CGGTCGAGCC GCGCCTGCTG GTGTGCGACG AGCCGACCTC GGCGCTCGAC
GTGTCGGTGC AGGCGCAGAT CCTCAACCTG CTGCGCGAGC TGCAGCGCGA GCTCGGCGTG
TCCTACCTGT TCATCACGCA CAACATCGGC GTGGTCGAGT ACATCGCCGA CGAGGTGGCC
GTGATGCACC GCGGGCGCTT CGAGGAGGTG GGTCCGGTCG GCGGCGTGCT CGAAGCGCCG
CGCAGCGCCT ACACGCGTCG CCTGCTGGCG GCCGTGCCGA GGCTGGACCG CCAGATGTTC
CAATCGTCCC AGTTCGATCC ACCGTGA
 
Protein sequence
MSAAPADTLS IEALHVALDA DAGLVRAIDG LSLAITRGET FALVGESGCG KSMTALALMR 
LLPENGRVTA GSVRLGGEEL LDLPESRMRA VRGARVGMIF QEPATSLNPV MRIGTQIVEA
IEAHTALRGA AARAKALDWL KRVGIPEPER RIDDYPFRLS GGQKQRVMIA IALAAEPEFL
VADEPTTALD VTIQKQILDL LRELQRERGL GLMLITHDLG VVAGMAQTVA LMYAGQIVEV
ASAKDFFAHP RHPYARLLLR AVPDASQRGG ELAAIAGSVP PLWRRFEGCR FADRCDRVFD
RCHGTEPPLI ETAAGHQVRC LLYVDGASPP GSAPATTAID APAARPAPAE PSLLLDVQNL
VVRFPVRGGL LQRARSHVTA VDGVSFRLDA GRTLALVGES GCGKTTIGKA LLQLLRGTAA
VEGRALWRGE DLFSLQGDAL RRARREIQIV FQDPFASLDP RMRVFEALEE GLVALRPELD
RAARRARIET LVERVGLRRD ALERWPHEFS GGQRQRIAIA RALAVEPRLL VCDEPTSALD
VSVQAQILNL LRELQRELGV SYLFITHNIG VVEYIADEVA VMHRGRFEEV GPVGGVLEAP
RSAYTRRLLA AVPRLDRQMF QSSQFDPP