Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1753 |
Symbol | |
ID | 4784211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1880627 |
End bp | 1882513 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640090323 |
Product | ATPase component ABC-type dipeptide/oligopeptide/nickel transport system |
Protein accession | YP_001020947 |
Protein GI | 124266943 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.813724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCTG CGCCTGCAGA CACCCTGTCC ATCGAGGCGC TGCACGTCGC GCTCGACGCC GACGCCGGCC TGGTGCGCGC GATCGACGGC CTGAGCCTGG CGATCACGCG TGGCGAGACC TTCGCGCTGG TGGGCGAGTC GGGCTGCGGC AAGAGCATGA CGGCGTTGGC GCTGATGCGG TTGCTGCCCG AGAACGGCCG CGTCACCGCG GGCTCGGTGC GGCTGGGCGG CGAGGAACTG CTGGACCTGC CGGAGTCGCG CATGCGGGCG GTGCGCGGTG CGCGCGTCGG CATGATCTTC CAGGAGCCGG CGACCAGCCT GAACCCGGTG ATGCGGATCG GCACGCAGAT CGTCGAAGCG ATCGAGGCGC ACACGGCGCT GCGCGGCGCG GCAGCGCGGG CCAAGGCGCT GGACTGGCTG AAGCGCGTGG GCATCCCCGA GCCCGAGAGG CGCATCGACG ACTACCCGTT CCGCCTGAGC GGCGGGCAGA AGCAGCGCGT GATGATCGCC ATCGCGCTGG CCGCCGAGCC CGAGTTCCTG GTGGCCGACG AGCCGACCAC CGCACTCGAC GTCACGATCC AGAAGCAGAT CCTCGACCTG CTGCGCGAAC TGCAGCGCGA GCGCGGACTG GGGCTGATGC TGATCACGCA CGACCTCGGC GTGGTGGCCG GCATGGCGCA GACGGTGGCG CTGATGTATG CCGGCCAGAT CGTCGAGGTG GCGAGCGCGA AGGACTTCTT CGCCCACCCG CGCCACCCCT ACGCCCGGCT GCTGTTGCGC GCCGTGCCCG ACGCCAGCCA GCGCGGCGGC GAGCTCGCGG CGATCGCCGG CAGCGTGCCG CCGCTGTGGC GGCGCTTCGA GGGCTGCCGC TTCGCCGACC GCTGCGACCG CGTGTTCGAT CGCTGCCACG GTACCGAGCC GCCGCTGATC GAGACCGCGG CCGGCCATCA GGTGCGCTGC CTGCTGTATG TCGACGGCGC ATCGCCGCCC GGGTCGGCGC CGGCCACGAC AGCGATCGAC GCGCCTGCGG CCCGGCCGGC GCCGGCCGAG CCCTCGCTGC TGCTGGACGT GCAGAACCTC GTGGTGCGTT TCCCGGTGCG CGGCGGGCTG CTGCAGCGCG CCCGCTCGCA CGTGACGGCG GTCGACGGCG TGTCGTTCCG GCTCGACGCC GGGCGCACGC TGGCGCTGGT GGGCGAGTCG GGTTGCGGCA AGACGACGAT CGGCAAGGCC CTGCTGCAGC TGCTGCGCGG CACGGCGGCG GTCGAGGGCC GGGCGCTGTG GCGAGGCGAG GACCTGTTCT CGCTTCAGGG TGATGCGCTG CGGCGGGCGC GCCGCGAGAT CCAGATCGTG TTCCAGGACC CGTTCGCGTC GCTCGACCCG CGCATGCGGG TGTTCGAGGC GCTGGAGGAG GGCCTGGTTG CACTGCGGCC CGAACTCGAC CGTGCCGCGC GCCGCGCGCG CATCGAGACG CTGGTCGAGC GCGTCGGCCT GCGCCGCGAC GCACTGGAGC GCTGGCCGCA CGAGTTCTCG GGCGGCCAGC GCCAGCGCAT CGCGATCGCG CGGGCGCTGG CGGTCGAGCC GCGCCTGCTG GTGTGCGACG AGCCGACCTC GGCGCTCGAC GTGTCGGTGC AGGCGCAGAT CCTCAACCTG CTGCGCGAGC TGCAGCGCGA GCTCGGCGTG TCCTACCTGT TCATCACGCA CAACATCGGC GTGGTCGAGT ACATCGCCGA CGAGGTGGCC GTGATGCACC GCGGGCGCTT CGAGGAGGTG GGTCCGGTCG GCGGCGTGCT CGAAGCGCCG CGCAGCGCCT ACACGCGTCG CCTGCTGGCG GCCGTGCCGA GGCTGGACCG CCAGATGTTC CAATCGTCCC AGTTCGATCC ACCGTGA
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Protein sequence | MSAAPADTLS IEALHVALDA DAGLVRAIDG LSLAITRGET FALVGESGCG KSMTALALMR LLPENGRVTA GSVRLGGEEL LDLPESRMRA VRGARVGMIF QEPATSLNPV MRIGTQIVEA IEAHTALRGA AARAKALDWL KRVGIPEPER RIDDYPFRLS GGQKQRVMIA IALAAEPEFL VADEPTTALD VTIQKQILDL LRELQRERGL GLMLITHDLG VVAGMAQTVA LMYAGQIVEV ASAKDFFAHP RHPYARLLLR AVPDASQRGG ELAAIAGSVP PLWRRFEGCR FADRCDRVFD RCHGTEPPLI ETAAGHQVRC LLYVDGASPP GSAPATTAID APAARPAPAE PSLLLDVQNL VVRFPVRGGL LQRARSHVTA VDGVSFRLDA GRTLALVGES GCGKTTIGKA LLQLLRGTAA VEGRALWRGE DLFSLQGDAL RRARREIQIV FQDPFASLDP RMRVFEALEE GLVALRPELD RAARRARIET LVERVGLRRD ALERWPHEFS GGQRQRIAIA RALAVEPRLL VCDEPTSALD VSVQAQILNL LRELQRELGV SYLFITHNIG VVEYIADEVA VMHRGRFEEV GPVGGVLEAP RSAYTRRLLA AVPRLDRQMF QSSQFDPP
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