| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1736 |
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| Symbol | |
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| ID | 4785289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1861149 |
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| End bp | 1863362 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090307 |
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| Product | TonB-dependent receptor protein |
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| Protein accession | YP_001020931 |
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| Protein GI | 124266927 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00567556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAC TCGCCCCCGT GGCGCTGGCT GCGGCTATGG CCTGTCAGCT CCCCGCCGCG
TACGCGCAAT CCGAAACGCC ATCGGCCCCG GCCGACGCGA ACGCCACCGT GACGCTGCCG
CCGATCACCG TGAAGGCCAG TGCCGACGCC TCGGCGCAAG GGCTGTCCCC GGCGTTTCCG
GGCGGGCAGG TGGCGCGCGG CGGGCGCGCC GGCATCCTCG GCACCAAGGA CAACCTGGAC
ACGCCGTTCA GCATCACCAG CTACACCAAC GAACTGATCC AGGATCGCCA GGCCAGGAGC
GTCGGCGACG TGCTGCAGAA CGATCCGGGC GTGCGCGTGG CGCGCGGCTT CGGCAACTTC
CAGGAGTCGT ACTTCATCCG CGGCTTCATC CTCGGCTCCG ACGACGTGGC CTACAACGGC
CTGTACAACC TGCTGCCGCG CCAGTACATC GCGACGGAAT TGTTCGAGCG CGTGGAGGTG
TTGCGTGGCG CGTCGGCCTT CCTGTCCGGC GCCACGCCGT CGGGGGGTGG CCTCGGCGGC
AGCATCAACC TGCTGCCCAA GCGCGCCTCC AACGAAGACC TGAACCGCGT GACGGTCGGC
GCGGCCAGCG GGCCGCAGGG CAGCGCGGCC GTGGACATTT CCCGTCGCTT CGGTCCGGAC
CGGAGCACCG GCTTGCGCCT GAACGCGGCT TACCGTGATG GTGACACCGC GGTCGACGAG
GAAAAGACCC GTCTCGGCCT CGTCTCGTTG GGCGCGGACT GGCGCAGCCG CGACGTGCGA
CTGTCCGGCG ACATCGGCTT CCAGGACAAC CGGCTGAAGC GCACCCGCAG CAGCGTGACG
CTGGGCGATT TCCTGACGCC GGTGACGGCG ATGCCGGCCG TGCCGGACAA CGAGACGAAC
GCATCGCAAC CGTGGTCGTA CTCGAACGAG AAAGACGTGT TCGGTACCTT GCGCGGCGAA
GTCGACCTCG GAGCCGACGT CACGGCATGG GCGGCCTACG GCCTGCGCCG CAGCGACGAG
GCCAATTCGC TGGCGAACTT CACGCTGCTC GACCCGGTCA GCGGCGACGG CTACACCTAT
CGCTTCGACA ACACCCGCGA AGACCGCGTC GACACCGGCG AGTTGGGGCT GCGTGGCAAG
CTCAGGACGG GCAGCGTGGG TCACGAGTGG GTCGTCTCGG CGTCCTACTT CAGGCTGGAA
ACGAAGAACG CCTATCTGTT CGACTTCGGC AACCAGCAGG CCACCAATCT CTATCGGCCG
GTGCGGTCGC CCGAGCCGGC ATTCAGCGCC GGCGCCGGCG GCGGCAACGA TCTGGCGTCG
CCGGCGCTGA CGGCGCGCAC CCGCCTCACC AGTCTGGCGC TCGGCGACAC CTTGTCGTTC
GATGGCGATC GCTTTCTGCT GACACTGGGT GCCCGCCATC AGAACCTGCG CATCGAGAAC
TACGCCTACA CCACCGGCGT CGCTGCACCG GTCTACGACG ACAGCCGCGT CAGCCCGCTG
GTCGGCGCGG TCTACAAGGC GACGAAGCAG TTGTCGCTCT ACGCCAACTA CATCGAAGGC
CTGAGCAAGG GTGACACCGC GCCGGCCACA GCCAACAATC CGAACGCCAT GCTGGCGCCC
TATGTCTCCA AGCAGAAGGA GATCGGCGCG AAGTACGAGG CCGATCGCCT GGGCCTGGGT
GCAGCGCTCT TCAGCACCGA CAAGCCGCGA GCGGTGGGTG GCACCACCGG GACCACGTTC
ACCGCGGGCG GCGAGGATCG CCACCGGGGT GTCGAGCTGA CCGCCTACGG CGAGGCCGTA
CGCGGCCTGC GTGTGCTGGG CGGCCTGACT TGGCTCGATG CCAAGCAGAA GGAAACCGGC
AGTGCGGCCA CCGAGGGCAA GCGCACGCTG GGCATTCCCC GCACGCAGGC CAATCTCGGC
GTCGAGTGGG ACGTGACCGG CGTGCAGGGC CTCGCGCTCG ACGCCCGCGT GGTCCGCACC
GGGTCGGTCT ACGCCGACAG CGCCAACACG TTGCGCGTGC CCGGCTGGAC CCGGGTGGAT
GTGGGGGCGC GCTACCTGTT GGACGTGCAG GACCGCCTGG TGACGCTGCG CGCGCGCATC
GACAACCTGA CCGACCGTGA CTATTGGGCT TCGGTCGGCG GTTATCCGGA TGCCGGCTAT
CTGAACATCG GCGCGCCCCG CACCTTCGTG CTGAGCGCCA GCGTCGACTT CTGA
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| Protein sequence | MRTLAPVALA AAMACQLPAA YAQSETPSAP ADANATVTLP PITVKASADA SAQGLSPAFP
GGQVARGGRA GILGTKDNLD TPFSITSYTN ELIQDRQARS VGDVLQNDPG VRVARGFGNF
QESYFIRGFI LGSDDVAYNG LYNLLPRQYI ATELFERVEV LRGASAFLSG ATPSGGGLGG
SINLLPKRAS NEDLNRVTVG AASGPQGSAA VDISRRFGPD RSTGLRLNAA YRDGDTAVDE
EKTRLGLVSL GADWRSRDVR LSGDIGFQDN RLKRTRSSVT LGDFLTPVTA MPAVPDNETN
ASQPWSYSNE KDVFGTLRGE VDLGADVTAW AAYGLRRSDE ANSLANFTLL DPVSGDGYTY
RFDNTREDRV DTGELGLRGK LRTGSVGHEW VVSASYFRLE TKNAYLFDFG NQQATNLYRP
VRSPEPAFSA GAGGGNDLAS PALTARTRLT SLALGDTLSF DGDRFLLTLG ARHQNLRIEN
YAYTTGVAAP VYDDSRVSPL VGAVYKATKQ LSLYANYIEG LSKGDTAPAT ANNPNAMLAP
YVSKQKEIGA KYEADRLGLG AALFSTDKPR AVGGTTGTTF TAGGEDRHRG VELTAYGEAV
RGLRVLGGLT WLDAKQKETG SAATEGKRTL GIPRTQANLG VEWDVTGVQG LALDARVVRT
GSVYADSANT LRVPGWTRVD VGARYLLDVQ DRLVTLRARI DNLTDRDYWA SVGGYPDAGY
LNIGAPRTFV LSASVDF
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