| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1640 |
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| Symbol | copF |
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| ID | 4787266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1768835 |
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| End bp | 1771288 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640090209 |
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| Product | P1 ATPase/HMA domain-containing protein |
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| Protein accession | YP_001020837 |
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| Protein GI | 124266833 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0650256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG CCGCACTGTC CGACATCAAG CTTCAGGTCA CGGGCATGAC CTGCGCCTCC
TGCGTCATGC GCGTCGAGAA GTCGCTCAAG GCTGTCCCCG GCGTCAGGCA AGCCAGCATC
AACCTGGCGA CCGAACAAGC CGTCGTGAGC GCCGACCCTG CAGTGACGGC CGACACGCTG
GCCGCTGCCG TGCGCAAAGC CGGCTACGAC CTGGCAACGA CCGAAACCAC GCTGCTGGTC
GAAGGCATGA CCTGCGCCTC GTGCGTGTCT CGCGTCGAGA AGGCGCTGCG AAAGATCCCC
GGCGTATCCG GCGCCACGGT GAATCTTGCG ACTGAAAAGG CAAACATCCA GGCGCTGTCG
ACCGTGTCGG TCGCAGCGCT GAAGGCCGCG ATCGAGAAGG CCGGCTACAG CGCGAAGGAC
GTTCAGGACG CGAAGTCGCA GCCGGCTGCC CGTTTGCCGG CCTGGTGGCC GGTGGCCGTG
AGCGGCGCGT TGACGCTGCC CCTGGTCCTG CCGATGCTGC TGCAGCTCTT CGGCATCGAC
TGGATGCTGG ATGGCTGGCT CCAACTGGCC CTCGTAACCC CGGTGCAGTT CTGGCTCGGC
TGGCGCTTCT ACCGCGCGGG CTGGAAGGCC TTGCTCGCCA AGACCGGCAA CATGGACCTG
CTGGTGGCCT TGGGCACTTC GGCGGCCTAC GGGCTATCTG TCTACCTGCT CTTCAAGCAT
GCCGCGCATG GCATGCCGCA CCTGTACTTC GAAGCCTCCG CAGCCGTCAT CACGCTGGTG
CTGCTGGGGA AGTGGCTCGA GCAGCGCGCG AAGCGGCAGA CGGCCGATGC CATCCGGGCG
CTGAACGCGC TGCGGCCGAC CACCGCCCGC GTGCGCCGTG GTGAAGTCGA GTTGGACCTT
CCGGTGGAAC ACGTCGTGGT CGGCGACCTC GTCATCGTGC GCCCCGGAGA CCGCGTGGCC
GTCGACGGCG AGATCGTCGA AGGCCGCAGC CACATTGATG AGTCGCTCAT CACCGGCGAA
AGCCTGCCGG TGGCCAAGGG CGTGGGCGAC AAAGTGACCG GCGGCGCGAT CAATGCCGAA
GGCGCTCTGA CCGTCCGCAC GACGGCCATC GGCGCCGAGA CGACGCTGGC CCGCATCATC
CGCATGGTCG AATCGGCTCA GGCCGCGAAG GCTCCCATCC AGCGCATCGT GGACCGCGTG
AGCGCGGTGT TCGTTCCCGT GGTGCTGGTC ATCGCACTGC TCACGTTCCT GGGATGGTTC
GGCTTTACGG GTGATTGGGA GCATGCGCTC ATCAACGCTG TCGCGGTGTT GGTCATCGCT
TGCCCGTGTG CGCTGGGTCT GGCCACGCCC ACGGCCATCA TGGCCGGCAC CGGCGTCGCT
GCGCGCCACG GCATCCTCAT CAAGGACGCC GAAGCGCTGG AGGTCGCACA CGCCGTCACC
GTGGTCGCGT TCGACAAGAC CGGCACGCTC ACCGAAGGCA AGCCGTTGCT CGCTGCCGTG
GTGGCAGCGG TAGGTTCGAC CCGGGACGAT GTGCTGCGGC TGGCCGCTGC GCTGCAGAAG
TCGAGCAGCC ATCCGCTCGC CGTGGCCGTG ATGGACCAGG TTCGCCATGA GCGCCTGCTG
GTGCCCGAGG CGCACGATGC CCAGGCGCTG CCGGGGCGCG GGGTGCAGGG CGCGGTGCGT
GGCCAGACGC TGGCCCTGGG CAGCACGCGC ATGCTGCGCG AGCTGGGTCT TGAAGAAGGC
GGCTTGCATG CTGAAGCGCA ACGGCTGGAG CGGCAGGGCC AGACCGTGTC GTGGCTGGTC
CAGTCCGATG TTGCCCAGCG TCGTCTGCTC GGTCTCCTGG CCTTCGGCGA CACGGTGAAG
CCGGCCGCGG CGCAAGCCGT GTCGCGGCTG CATCAGCTCG GCATCCGCAC CGTGATGTTG
ACCGGAGACA ACCGCGGCGC AGCCGACGCC GTCGCGAAAG AACTGGGCAT CGCCGAGGTG
CGCGCCGAGG TGCTGCCGGG CGACAAGGCC GCCATCGTCA AGGAACTGCG CGACGCCGGC
GAAGTGGTGG CCTTCGTCGG CGATGGCCTG AACGACGGAC CGGCGCTGGC TGCCGCTTCG
GTGTCATACG CGATGGCGGG CGGCGCCGAC GTGGCGACCG AGACCGCCGG CATCACGCTG
ATGCGCGGCG ACCCGAGGCT GGTGGCCGAC TCGCTGGACA TCTCGCGCCG CACCTACTCG
AAAATCAAGC AGGGCCTGTT CTGGGCCTTC GGCTACAACG TGCTCGGCAT TCCCCTCGCA
GCACTGGGCC TGCTGAACCC GGTCATCGCC GGTGCCGCGA TGGCCTTCAG CAGCGTCAGC
GTGGTGCTGA ACGCGCTGAC GCTGCGCCGC TGGCACGGGG TCGCCAACGA GCATTCGGCG
CAGCCGACAA ACCAGCAGCC ACGAATCGTG GCAGCCTTGG GAGAGCAGCG ATGA
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| Protein sequence | MNTAALSDIK LQVTGMTCAS CVMRVEKSLK AVPGVRQASI NLATEQAVVS ADPAVTADTL
AAAVRKAGYD LATTETTLLV EGMTCASCVS RVEKALRKIP GVSGATVNLA TEKANIQALS
TVSVAALKAA IEKAGYSAKD VQDAKSQPAA RLPAWWPVAV SGALTLPLVL PMLLQLFGID
WMLDGWLQLA LVTPVQFWLG WRFYRAGWKA LLAKTGNMDL LVALGTSAAY GLSVYLLFKH
AAHGMPHLYF EASAAVITLV LLGKWLEQRA KRQTADAIRA LNALRPTTAR VRRGEVELDL
PVEHVVVGDL VIVRPGDRVA VDGEIVEGRS HIDESLITGE SLPVAKGVGD KVTGGAINAE
GALTVRTTAI GAETTLARII RMVESAQAAK APIQRIVDRV SAVFVPVVLV IALLTFLGWF
GFTGDWEHAL INAVAVLVIA CPCALGLATP TAIMAGTGVA ARHGILIKDA EALEVAHAVT
VVAFDKTGTL TEGKPLLAAV VAAVGSTRDD VLRLAAALQK SSSHPLAVAV MDQVRHERLL
VPEAHDAQAL PGRGVQGAVR GQTLALGSTR MLRELGLEEG GLHAEAQRLE RQGQTVSWLV
QSDVAQRRLL GLLAFGDTVK PAAAQAVSRL HQLGIRTVML TGDNRGAADA VAKELGIAEV
RAEVLPGDKA AIVKELRDAG EVVAFVGDGL NDGPALAAAS VSYAMAGGAD VATETAGITL
MRGDPRLVAD SLDISRRTYS KIKQGLFWAF GYNVLGIPLA ALGLLNPVIA GAAMAFSSVS
VVLNALTLRR WHGVANEHSA QPTNQQPRIV AALGEQR
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